Literature DB >> 1570324

Anticodon-independent aminoacylation of an RNA minihelix with valine.

M Frugier1, C Florentz, R Giegé.   

Abstract

Minihelices mimicking the amino acid acceptor and anticodon branches of yeast tRNA(Val) have been synthesized by in vitro transcription of synthetic templates. It is shown that a minihelix corresponding to the amino acid acceptor branch and containing solely a valine-specific identity nucleotide can be aminoacylated by yeast valyl-tRNA synthetase. Its charging ability is lost after mutating this nucleotide. This ability is stimulated somewhat by the addition of a second hairpin helix that mimicks the anticodon arm, which suggests that information originating from the anticodon stem-loop can be transmitted to the active site of the enzyme by the core of the protein.

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Year:  1992        PMID: 1570324      PMCID: PMC525617          DOI: 10.1073/pnas.89.9.3990

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Enzymatic aminoacylation of an eight-base-pair microhelix with histidine.

Authors:  C Francklyn; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

2.  Identity elements for specific aminoacylation of yeast tRNA(Asp) by cognate aspartyl-tRNA synthetase.

Authors:  J Pütz; J D Puglisi; C Florentz; R Giegé
Journal:  Science       Date:  1991-06-21       Impact factor: 47.728

3.  Rapid determination of nucleotides that define tRNA(Gly) acceptor identity.

Authors:  W H McClain; K Foss; R A Jenkins; J Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  1991-07-15       Impact factor: 11.205

4.  Aminoacylation of alanine minihelices. "Discriminator" base modulates transition state of single turnover reaction.

Authors:  J P Shi; P Schimmel
Journal:  J Biol Chem       Date:  1991-02-15       Impact factor: 5.157

5.  Specific valylation identity of turnip yellow mosaic virus RNA by yeast valyl-tRNA synthetase is directed by the anticodon in a kinetic rather than affinity-based discrimination.

Authors:  C Florentz; T W Dreher; J Rudinger; R Giege
Journal:  Eur J Biochem       Date:  1991-01-01

6.  Anticodon switching changes the identity of methionine and valine transfer RNAs.

Authors:  L H Schulman; H Pelka
Journal:  Science       Date:  1988-11-04       Impact factor: 47.728

7.  Role of the extra G-C pair at the end of the acceptor stem of tRNA(His) in aminoacylation.

Authors:  H Himeno; T Hasegawa; T Ueda; K Watanabe; K Miura; M Shimizu
Journal:  Nucleic Acids Res       Date:  1989-10-11       Impact factor: 16.971

8.  On the properties and utility of a membrane filter assay in the study of isoleucyl-tRNA synthetase.

Authors:  M Yarus; P Berg
Journal:  Anal Biochem       Date:  1970-06       Impact factor: 3.365

9.  Nucleotides that determine Escherichia coli tRNA(Arg) and tRNA(Lys) acceptor identities revealed by analyses of mutant opal and amber suppressor tRNAs.

Authors:  W H McClain; K Foss; R A Jenkins; J Schneider
Journal:  Proc Natl Acad Sci U S A       Date:  1990-12       Impact factor: 11.205

10.  Anticodon and acceptor stem nucleotides in tRNA(Gln) are major recognition elements for E. coli glutaminyl-tRNA synthetase.

Authors:  M Jahn; M J Rogers; D Söll
Journal:  Nature       Date:  1991-07-18       Impact factor: 49.962

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  26 in total

1.  Domain-domain communication in a miniature archaebacterial tRNA synthetase.

Authors:  B A Steer; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  An in vitro evolved precursor tRNA with aminoacylation activity.

Authors:  H Saito; D Kourouklis; H Suga
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

3.  Defects in tRNA processing and nuclear export induce GCN4 translation independently of phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2.

Authors:  H Qiu; C Hu; J Anderson; G R Björk; S Sarkar; A K Hopper; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

4.  Assembly of a catalytic unit for RNA microhelix aminoacylation using nonspecific RNA binding domains.

Authors:  J W Chihade; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

5.  RNA ligation and the origin of tRNA.

Authors:  Uma Nagaswamy; George E Fox
Journal:  Orig Life Evol Biosph       Date:  2003-04       Impact factor: 1.950

6.  tRNA acceptor-stem and anticodon bases embed separate features of amino acid chemistry.

Authors:  Charles W Carter; Richard Wolfenden
Journal:  RNA Biol       Date:  2015-11-23       Impact factor: 4.652

7.  Variant minihelix RNAs reveal sequence-specific recognition of the helical tRNA(Ser) acceptor stem by E.coli seryl-tRNA synthetase.

Authors:  M E Saks; J R Sampson
Journal:  EMBO J       Date:  1996-06-03       Impact factor: 11.598

8.  Two conformations of a crystalline human tRNA synthetase-tRNA complex: implications for protein synthesis.

Authors:  Xiang-Lei Yang; Francella J Otero; Karla L Ewalt; Jianming Liu; Manal A Swairjo; Caroline Köhrer; Uttam L RajBhandary; Robert J Skene; Duncan E McRee; Paul Schimmel
Journal:  EMBO J       Date:  2006-05-25       Impact factor: 11.598

9.  Multicopy tRNA genes functionally suppress mutations in yeast eIF-2 alpha kinase GCN2: evidence for separate pathways coupling GCN4 expression to unchanged tRNA.

Authors:  C R Vazquez de Aldana; R C Wek; P S Segundo; A G Truesdell; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

10.  Species-specific differences in the operational RNA code for aminoacylation of tRNA(Trp).

Authors:  F Xu; X Chen; L Xin; L Chen; Y Jin; D Wang
Journal:  Nucleic Acids Res       Date:  2001-10-15       Impact factor: 16.971

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