Literature DB >> 15689451

Analysis of IMGSAC autism susceptibility loci: evidence for sex limited and parent of origin specific effects.

J A Lamb1, G Barnby, E Bonora, N Sykes, E Bacchelli, F Blasi, E Maestrini, J Broxholme, J Tzenova, D Weeks, A J Bailey, A P Monaco.   

Abstract

BACKGROUND AND METHODS: Autism is a severe neurodevelopmental disorder, which has a complex genetic predisposition. The ratio of males to females affected by autism is approximately 4:1, suggesting that sex specific factors are involved in its development. We reported previously the results of a genomewide screen for autism susceptibility loci in 83 affected sibling pairs (ASP), and follow up analysis in 152 ASP. Here, we report analysis of an expanded sample of 219 ASP, using sex and parent of origin linkage modelling at loci on chromosomes 2, 7, 9, 15, and 16.
RESULTS: The results suggest that linkage to chromosomes 7q and 16p is contributed largely by the male-male ASP (MLS = 2.55 v 0.12, and MLS = 2.48 v 0.00, for the 145 male-male and 74 male-female/female-female ASP on chromosomes 7 and 16 respectively). Conversely linkage to chromosome 15q appears to be attributable to the male-female/female-female ASP (MLS = 2.62 v 0.00, for non-male and male-male ASP respectively). On chromosomes 2 and 9, all ASP contribute to linkage. These data, supported by permutation, suggest a possible sex limited effect of susceptibility loci on chromosomes 7, 15, and 16. Parent of origin linkage modelling indicates two distinct regions of paternal and maternal identity by descent sharing on chromosome 7 (paternal MLS = 1.46 at approximately 112 cM, and maternal MLS = 1.83 at approximately 135 cM; corresponding maternal and paternal MLS = 0.53 and 0.28 respectively), and maternal specific sharing on chromosome 9 (maternal MLS = 1.99 at approximately 30 cM; paternal MLS = 0.02).
CONCLUSION: These data support the possibility of two discrete loci underlying linkage of autism to chromosome 7, and implicate possible parent of origin specific effects in the aetiology of autism.

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Year:  2005        PMID: 15689451      PMCID: PMC1735992          DOI: 10.1136/jmg.2004.025668

Source DB:  PubMed          Journal:  J Med Genet        ISSN: 0022-2593            Impact factor:   6.318


  42 in total

1.  Imprinting analysis of 10 genes and/or transcripts in a 1.5-Mb MEST-flanking region at human chromosome 7q32.

Authors:  Takahiro Yamada; Kohzoh Mitsuya; Tomohiko Kayashima; Kentaro Yamasaki; Tohru Ohta; Koh-ichiro Yoshiura; Naomichi Matsumoto; Hideto Yamada; Hisanori Minakami; Mitsuo Oshimura; Norio Niikawa; Tatsuya Kishino
Journal:  Genomics       Date:  2004-03       Impact factor: 5.736

2.  Parametric and nonparametric linkage analysis: a unified multipoint approach.

Authors:  L Kruglyak; M J Daly; M P Reeve-Daly; E S Lander
Journal:  Am J Hum Genet       Date:  1996-06       Impact factor: 11.025

Review 3.  Affected sibpair linkage tests for multiple linked susceptibility genes.

Authors:  M Farrall
Journal:  Genet Epidemiol       Date:  1997       Impact factor: 2.135

4.  Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results.

Authors:  E Lander; L Kruglyak
Journal:  Nat Genet       Date:  1995-11       Impact factor: 38.330

5.  Asymptotic properties of affected-sib-pair linkage analysis.

Authors:  P Holmans
Journal:  Am J Hum Genet       Date:  1993-02       Impact factor: 11.025

6.  Latent-class analysis of recurrence risks for complex phenotypes with selection and measurement error: a twin and family history study of autism.

Authors:  A Pickles; P Bolton; H Macdonald; A Bailey; A Le Couteur; C H Sim; M Rutter
Journal:  Am J Hum Genet       Date:  1995-09       Impact factor: 11.025

7.  Autism and the X chromosome. Multipoint sib-pair analysis.

Authors:  J Hallmayer; J M Hebert; D Spiker; L Lotspeich; W M McMahon; P B Petersen; P Nicholas; C Pingree; A A Lin; L L Cavalli-Sforza; N Risch; R D Ciaranello
Journal:  Arch Gen Psychiatry       Date:  1996-11

8.  Autism Diagnostic Interview-Revised: a revised version of a diagnostic interview for caregivers of individuals with possible pervasive developmental disorders.

Authors:  C Lord; M Rutter; A Le Couteur
Journal:  J Autism Dev Disord       Date:  1994-10

9.  Linkage analysis for autism in a subset families with obsessive-compulsive behaviors: evidence for an autism susceptibility gene on chromosome 1 and further support for susceptibility genes on chromosome 6 and 19.

Authors:  J D Buxbaum; J Silverman; M Keddache; C J Smith; E Hollander; N Ramoz; J G Reichert
Journal:  Mol Psychiatry       Date:  2004-02       Impact factor: 15.992

10.  The VITESSE algorithm for rapid exact multilocus linkage analysis via genotype set-recoding and fuzzy inheritance.

Authors:  J R O'Connell; D E Weeks
Journal:  Nat Genet       Date:  1995-12       Impact factor: 38.330

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  40 in total

1.  Genome-scan for IQ discrepancy in autism: evidence for loci on chromosomes 10 and 16.

Authors:  Nicola H Chapman; Annette Estes; Jeff Munson; Raphael Bernier; Sara J Webb; Joseph H Rothstein; Nancy J Minshew; Geraldine Dawson; Gerard D Schellenberg; Ellen M Wijsman
Journal:  Hum Genet       Date:  2010-10-21       Impact factor: 4.132

Review 2.  Developmental neurogenetics and multimodal neuroimaging of sex differences in autism.

Authors:  Christina Chen; John Darrell Van Horn
Journal:  Brain Imaging Behav       Date:  2017-02       Impact factor: 3.978

3.  Variants in several genomic regions associated with asperger disorder.

Authors:  D Salyakina; D Q Ma; J M Jaworski; I Konidari; P L Whitehead; R Henson; D Martinez; J L Robinson; S Sacharow; H H Wright; R K Abramson; J R Gilbert; M L Cuccaro; M A Pericak-Vance
Journal:  Autism Res       Date:  2010-12       Impact factor: 5.216

4.  When linkage signal for autism MET candidate gene.

Authors:  Daniel B Campbell
Journal:  Eur J Hum Genet       Date:  2008-11-12       Impact factor: 4.246

Review 5.  Early pharmacological treatment of autism: a rationale for developmental treatment.

Authors:  Terrence C Bethea; Linmarie Sikich
Journal:  Biol Psychiatry       Date:  2007-02-15       Impact factor: 13.382

Review 6.  Autism spectrum disorder in sub-saharan africa: A comprehensive scoping review.

Authors:  Lauren Franz; Nola Chambers; Megan von Isenburg; Petrus J de Vries
Journal:  Autism Res       Date:  2017-03-07       Impact factor: 5.216

7.  Identification of Rare, Single-Nucleotide Mutations in NDE1 and Their Contributions to Schizophrenia Susceptibility.

Authors:  Hiroki Kimura; Daisuke Tsuboi; Chenyao Wang; Itaru Kushima; Takayoshi Koide; Masashi Ikeda; Yoshimi Iwayama; Tomoko Toyota; Noriko Yamamoto; Shohko Kunimoto; Yukako Nakamura; Akira Yoshimi; Masahiro Banno; Jingrui Xing; Yuto Takasaki; Mami Yoshida; Branko Aleksic; Yota Uno; Takashi Okada; Tetsuya Iidaka; Toshiya Inada; Michio Suzuki; Hiroshi Ujike; Hiroshi Kunugi; Tadafumi Kato; Takeo Yoshikawa; Nakao Iwata; Kozo Kaibuchi; Norio Ozaki
Journal:  Schizophr Bull       Date:  2014-10-20       Impact factor: 9.306

8.  Genome-wide prediction of imprinted murine genes.

Authors:  Philippe P Luedi; Alexander J Hartemink; Randy L Jirtle
Journal:  Genome Res       Date:  2005-06       Impact factor: 9.043

9.  Polymorphisms in leucine-rich repeat genes are associated with autism spectrum disorder susceptibility in populations of European ancestry.

Authors:  Inês Sousa; Taane G Clark; Richard Holt; Alistair T Pagnamenta; Erik J Mulder; Ruud B Minderaa; Anthony J Bailey; Agatino Battaglia; Sabine M Klauck; Fritz Poustka; Anthony P Monaco
Journal:  Mol Autism       Date:  2010-03-25       Impact factor: 7.509

10.  Linkage, association, and gene-expression analyses identify CNTNAP2 as an autism-susceptibility gene.

Authors:  Maricela Alarcón; Brett S Abrahams; Jennifer L Stone; Jacqueline A Duvall; Julia V Perederiy; Jamee M Bomar; Jonathan Sebat; Michael Wigler; Christa L Martin; David H Ledbetter; Stanley F Nelson; Rita M Cantor; Daniel H Geschwind
Journal:  Am J Hum Genet       Date:  2008-01       Impact factor: 11.025

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