Literature DB >> 15685225

DNA supercoiling - a global transcriptional regulator for enterobacterial growth?

Andrew Travers1, Georgi Muskhelishvili.   

Abstract

A fundamental principle of exponential bacterial growth is that no more ribosomes are produced than are necessary to support the balance between nutrient availability and protein synthesis. Although this conclusion was first expressed more than 40 years ago, a full understanding of the molecular mechanisms involved remains elusive and the issue is still controversial. There is currently agreement that, although many different systems are undoubtedly involved in fine-tuning this balance, an important control, and in our opinion perhaps the main control, is regulation of the rate of transcription initiation of the stable (ribosomal and transfer) RNA transcriptons. In this review, we argue that regulation of DNA supercoiling provides a coherent explanation for the main modes of transcriptional control - stringent control, growth-rate control and growth-phase control - during the normal growth of Escherichia coli.

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Year:  2005        PMID: 15685225     DOI: 10.1038/nrmicro1088

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  126 in total

1.  Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle.

Authors:  Patrick Sobetzko; Andrew Travers; Georgi Muskhelishvili
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-19       Impact factor: 11.205

Review 2.  Single-molecule measurements of DNA topology and topoisomerases.

Authors:  Keir C Neuman
Journal:  J Biol Chem       Date:  2010-04-09       Impact factor: 5.157

3.  Genomic identification of a novel mutation in hfq that provides multiple benefits in evolving glucose-limited populations of Escherichia coli.

Authors:  Ram Maharjan; Zhemin Zhou; Yan Ren; Yang Li; Joël Gaffé; Dominique Schneider; Christopher McKenzie; Peter R Reeves; Thomas Ferenci; Lei Wang
Journal:  J Bacteriol       Date:  2010-06-11       Impact factor: 3.490

Review 4.  Cellular strategies for regulating DNA supercoiling: a single-molecule perspective.

Authors:  Daniel A Koster; Aurélien Crut; Stewart Shuman; Mary-Ann Bjornsti; Nynke H Dekker
Journal:  Cell       Date:  2010-08-20       Impact factor: 41.582

5.  Phenotypic landscape of a bacterial cell.

Authors:  Robert J Nichols; Saunak Sen; Yoe Jin Choo; Pedro Beltrao; Matylda Zietek; Rachna Chaba; Sueyoung Lee; Krystyna M Kazmierczak; Karis J Lee; Angela Wong; Michael Shales; Susan Lovett; Malcolm E Winkler; Nevan J Krogan; Athanasios Typas; Carol A Gross
Journal:  Cell       Date:  2010-12-23       Impact factor: 41.582

6.  Nucleoid remodeling by an altered HU protein: reorganization of the transcription program.

Authors:  Sudeshna Kar; Rotem Edgar; Sankar Adhya
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-28       Impact factor: 11.205

Review 7.  Organization of supercoil domains and their reorganization by transcription.

Authors:  Shuang Deng; Richard A Stein; N Patrick Higgins
Journal:  Mol Microbiol       Date:  2005-09       Impact factor: 3.501

8.  Loss of topoisomerase I function affects the RpoS-dependent and GAD systems of acid resistance in Escherichia coli.

Authors:  Natalee Stewart; Jingyang Feng; Xiaoping Liu; Devyani Chaudhuri; John W Foster; Marc Drolet; Yuk-Ching Tse-Dinh
Journal:  Microbiology (Reading)       Date:  2005-08       Impact factor: 2.777

Review 9.  The role of supercoiling in transcriptional control of MYC and its importance in molecular therapeutics.

Authors:  Tracy A Brooks; Laurence H Hurley
Journal:  Nat Rev Cancer       Date:  2009-11-12       Impact factor: 60.716

10.  The Dynamic Interplay Between DNA Topoisomerases and DNA Topology.

Authors:  Yeonee Seol; Keir C Neuman
Journal:  Biophys Rev       Date:  2016-07-02
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