Literature DB >> 15516689

Nucleosome assembly protein 1 exchanges histone H2A-H2B dimers and assists nucleosome sliding.

Young-Jun Park1, Jayanth V Chodaparambil, Yunhe Bao, Steven J McBryant, Karolin Luger.   

Abstract

Eukaryotic chromatin is highly dynamic and turns over rapidly even in the absence of DNA replication. Here we show that the acidic histone chaperone nucleosome assembly protein 1 (NAP-1) from yeast reversibly removes and replaces histone protein dimer H2A-H2B or histone variant dimers from assembled nucleosomes, resulting in active histone exchange. Transient removal of H2A-H2B dimers facilitates nucleosome sliding along the DNA to a thermodynamically favorable position. Histone exchange as well as nucleosome sliding is independent of ATP and relies on the presence of the C-terminal acidic domain of yeast NAP-1, even though this region is not required for histone binding and chromatin assembly. Our results suggest a novel role for NAP-1 (and perhaps other acidic histone chaperones) in mediating chromatin fluidity by incorporating histone variants and assisting nucleosome sliding. NAP-1 may function either untargeted (if acting alone) or may be targeted to specific regions within the genome through interactions with additional factors.

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Year:  2004        PMID: 15516689     DOI: 10.1074/jbc.M411347200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  84 in total

1.  Large multimeric assemblies of nucleosome assembly protein and histones revealed by small-angle X-ray scattering and electron microscopy.

Authors:  Emily R Newman; G Geoff Kneale; Raimond B G Ravelli; Manikandan Karuppasamy; Fatemeh Karimi Nejadasl; Ian A Taylor; John E McGeehan
Journal:  J Biol Chem       Date:  2012-06-15       Impact factor: 5.157

2.  Nucleosome Dynamics during Transcription Elongation.

Authors:  Mai T Huynh; Satya P Yadav; Joseph C Reese; Tae-Hee Lee
Journal:  ACS Chem Biol       Date:  2020-12-02       Impact factor: 5.100

3.  ASF1 binds to a heterodimer of histones H3 and H4: a two-step mechanism for the assembly of the H3-H4 heterotetramer on DNA.

Authors:  Christine M English; Nasib K Maluf; Brian Tripet; Mair E A Churchill; Jessica K Tyler
Journal:  Biochemistry       Date:  2005-10-25       Impact factor: 3.162

Review 4.  Histone structure and nucleosome stability.

Authors:  Leonardo Mariño-Ramírez; Maricel G Kann; Benjamin A Shoemaker; David Landsman
Journal:  Expert Rev Proteomics       Date:  2005-10       Impact factor: 3.940

Review 5.  Dynamic nucleosomes.

Authors:  Karolin Luger
Journal:  Chromosome Res       Date:  2006       Impact factor: 5.239

6.  Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent chromatin assembly dynamics.

Authors:  Jie Yan; Thomas J Maresca; Dunja Skoko; Christian D Adams; Botao Xiao; Morten O Christensen; Rebecca Heald; John F Marko
Journal:  Mol Biol Cell       Date:  2006-11-15       Impact factor: 4.138

7.  The structure of nucleosome assembly protein 1.

Authors:  Young-Jun Park; Karolin Luger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

8.  High-resolution structure of the native histone octamer.

Authors:  Christopher M Wood; James M Nicholson; Stanley J Lambert; Laurent Chantalat; Colin D Reynolds; John P Baldwin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-06-01

9.  Human histone chaperone nucleophosmin enhances acetylation-dependent chromatin transcription.

Authors:  V Swaminathan; A Hari Kishore; K K Febitha; Tapas K Kundu
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

10.  Dynamic and selective nucleosome repositioning during endotoxin tolerance.

Authors:  Mohamed El Gazzar; Tiefu Liu; Barbara K Yoza; Charles E McCall
Journal:  J Biol Chem       Date:  2009-11-09       Impact factor: 5.157

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