Literature DB >> 15506748

Photodissociation of heme distal methionine in ferrous cytochrome C revealed by subpicosecond time-resolved resonance Raman spectroscopy.

Simona Cianetti1, Michel Négrerie, Marten H Vos, Jean-Louis Martin, Sergei G Kruglik.   

Abstract

Cytochrome c (cyt c) is an electron-transfer heme protein that also binds nitric oxide (NO). In resting cyt c, two endogenous ligands of the heme iron are histidine-18 (His) and methionine-80 (Met) side chains, and NO binding requires the cleavage of one of the axial bonds. Previous femtosecond transient absorption studies suggested the photolysis of either Fe-His or Fe-Met bonds. We aimed at unequivocally identifying the internal side chain that is photodissociated in ferrous cyt c and at monitoring heme structural dynamics, by means of time-resolved resonance Raman (TR3) spectroscopy with approximately 0.6 ps time resolution. The Fe-His stretching mode at 216 cm-1 has been observed in photoproduct TR3 spectra for the first time for a c-type heme. The same transient mode was observed for a model ferrous cyt c N-fragment (residues 1-56) ligated with two His in the resting state. Our TR3 data reveal that upon ferrous cyt c photoexcitation, (i) distal Met side chain is instantly released, producing a five-coordinated domed heme structure, (ii) proximal His side chain, coupled to the heme, exhibits distortion due to strain exerted by the protein, and (iii) alteration in heme-cysteine coupling takes place along with the relaxation of the protein-induced deformations of the heme macrocycle.

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Year:  2004        PMID: 15506748     DOI: 10.1021/ja046442i

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  9 in total

1.  Heme coordination states of unfolded ferrous cytochrome C.

Authors:  Enrica Droghetti; Silke Oellerich; Peter Hildebrandt; Giulietta Smulevich
Journal:  Biophys J       Date:  2006-07-28       Impact factor: 4.033

2.  Ultrafast photochemistry of the bc1 complex.

Authors:  Marten H Vos; Brandon J Reeder; Fevzi Daldal; Ursula Liebl
Journal:  Phys Chem Chem Phys       Date:  2017-03-01       Impact factor: 3.676

3.  The two transmembrane helices of CcoP are sufficient for assembly of the cbb3-type heme-copper oxygen reductase from Vibrio cholerae.

Authors:  Young O Ahn; Hyun Ju Lee; Daniel Kaluka; Syun-Ru Yeh; Denis L Rousseau; Pia Ädelroth; Robert B Gennis
Journal:  Biochim Biophys Acta       Date:  2015-06-25

Review 4.  The role of key residues in structure, function, and stability of cytochrome-c.

Authors:  Sobia Zaidi; Md Imtaiyaz Hassan; Asimul Islam; Faizan Ahmad
Journal:  Cell Mol Life Sci       Date:  2013-04-25       Impact factor: 9.261

5.  Investigations of vibrational coherence in the low-frequency region of ferric heme proteins.

Authors:  Flaviu Gruia; Minoru Kubo; Xiong Ye; Paul M Champion
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

6.  Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy.

Authors:  Sergei G Kruglik; Audrius Jasaitis; Klara Hola; Taku Yamashita; Ursula Liebl; Jean-Louis Martin; Marten H Vos
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-19       Impact factor: 11.205

7.  Short-lived metal-centered excited state initiates iron-methionine photodissociation in ferrous cytochrome c.

Authors:  Marco E Reinhard; Michael W Mara; Thomas Kroll; Hyeongtaek Lim; Ryan G Hadt; Roberto Alonso-Mori; Matthieu Chollet; James M Glownia; Silke Nelson; Dimosthenis Sokaras; Kristjan Kunnus; Tim Brandt van Driel; Robert W Hartsock; Kasper S Kjaer; Clemens Weninger; Elisa Biasin; Leland B Gee; Keith O Hodgson; Britt Hedman; Uwe Bergmann; Edward I Solomon; Kelly J Gaffney
Journal:  Nat Commun       Date:  2021-02-17       Impact factor: 14.919

8.  Ultrafast Dynamics and Vibrational Relaxation in Six-Coordinate Heme Proteins Revealed by Femtosecond Stimulated Raman Spectroscopy.

Authors:  Carino Ferrante; Giovanni Batignani; Emanuele Pontecorvo; Linda C Montemiglio; Marten H Vos; Tullio Scopigno
Journal:  J Am Chem Soc       Date:  2020-01-22       Impact factor: 15.419

9.  Investigations of the low frequency modes of ferric cytochrome c using vibrational coherence spectroscopy.

Authors:  Venugopal Karunakaran; Yuhan Sun; Abdelkrim Benabbas; Paul M Champion
Journal:  J Phys Chem B       Date:  2014-05-30       Impact factor: 2.991

  9 in total

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