Literature DB >> 15505214

The phytochrome-interacting transcription factor, PIF3, acts early, selectively, and positively in light-induced chloroplast development.

Elena Monte1, James M Tepperman, Bassem Al-Sady, Karen A Kaczorowski, Jose M Alonso, Joseph R Ecker, Xin Li, Yuelin Zhang, Peter H Quail.   

Abstract

The phytochrome (phy) family of sensory photoreceptors transduce informational light signals to selected nuclear genes, inducing plant growth and developmental responses appropriate to the environment. Existing data suggest that one signaling pathway by which this occurs involves direct, intranuclear interaction of the photoactivated phy molecule with PIF3, a basic helix-loop-helix transcription factor. Here, we provide evidence from recently identified pif3 mutant alleles that PIF3 is necessary for early chloroplast greening and rapid phy-induced expression of nuclear genes encoding chloroplast components upon first exposure of seedlings to light. Therefore, these data indicate that PIF3 functions to transduce phy signals to genes involved in a critical facet of the early seedling deetiolation process, the generation of a functional photosynthetic apparatus. When transgenically expressed GUS:PIF3 fusion protein constructs were used, we found that PIF3 protein levels are rapidly and reversibly modulated by the photoreceptor over diurnal cycles in Arabidopsis seedlings. The PIF3 protein declines rapidly to a basal steady-state level upon initial light exposure, but reaccumulates to preirradiation levels in darkness during the subsequent night period. These data suggest that PIF3 may function in early phy signaling at the dark-to-light transition, not only during initial seedling deetiolation, but daily at dawn under diurnal light-dark cycles.

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Year:  2004        PMID: 15505214      PMCID: PMC528976          DOI: 10.1073/pnas.0407107101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Photoreceptors in plant photomorphogenesis to date. Five phytochromes, two cryptochromes, one phototropin, and one superchrome.

Authors:  W R Briggs; M A Olney
Journal:  Plant Physiol       Date:  2001-01       Impact factor: 8.340

Review 2.  The phytochromes, a family of red/far-red absorbing photoreceptors.

Authors:  C Fankhauser
Journal:  J Biol Chem       Date:  2001-02-16       Impact factor: 5.157

Review 3.  Phytochromes and light signal perception by plants--an emerging synthesis.

Authors:  H Smith
Journal:  Nature       Date:  2000-10-05       Impact factor: 49.962

Review 4.  The diverse roles of ubiquitin and the 26S proteasome in the life of plants.

Authors:  James A Sullivan; Ken Shirasu; Xing Wang Deng
Journal:  Nat Rev Genet       Date:  2003-12       Impact factor: 53.242

5.  Functional characterization of phytochrome interacting factor 3 in phytochrome-mediated light signal transduction.

Authors:  Jonghyun Kim; Hankuil Yi; Goh Choi; Byongchul Shin; Pill-Soon Song; Giltsu Choi
Journal:  Plant Cell       Date:  2003-09-24       Impact factor: 11.277

6.  Expression profiling of phyB mutant demonstrates substantial contribution of other phytochromes to red-light-regulated gene expression during seedling de-etiolation.

Authors:  James M Tepperman; Matthew E Hudson; Rajnish Khanna; Tong Zhu; Sherman H Chang; Xun Wang; Peter H Quail
Journal:  Plant J       Date:  2004-06       Impact factor: 6.417

7.  Nuclear localization activity of phytochrome B.

Authors:  K Sakamoto; A Nagatani
Journal:  Plant J       Date:  1996-11       Impact factor: 6.417

8.  Temporal and spatial expression patterns of PHYA and PHYB genes in Arabidopsis.

Authors:  D E Somers; P H Quail
Journal:  Plant J       Date:  1995-03       Impact factor: 6.417

9.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

10.  Constitutive photomorphogenesis 1 and multiple photoreceptors control degradation of phytochrome interacting factor 3, a transcription factor required for light signaling in Arabidopsis.

Authors:  Diana Bauer; András Viczián; Stefan Kircher; Tabea Nobis; Roland Nitschke; Tim Kunkel; Kishore C S Panigrahi; Eva Adám; Erzsébet Fejes; Eberhard Schäfer; Ferenc Nagy
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

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  127 in total

1.  Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis.

Authors:  Judit Soy; Pablo Leivar; Nahuel González-Schain; Maria Sentandreu; Salomé Prat; Peter H Quail; Elena Monte
Journal:  Plant J       Date:  2012-06-11       Impact factor: 6.417

2.  Functional profiling identifies genes involved in organ-specific branches of the PIF3 regulatory network in Arabidopsis.

Authors:  Maria Sentandreu; Guiomar Martín; Nahuel González-Schain; Pablo Leivar; Judit Soy; James M Tepperman; Peter H Quail; Elena Monte
Journal:  Plant Cell       Date:  2011-11-22       Impact factor: 11.277

3.  Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.

Authors:  Pablo Leivar; Elena Monte; Megan M Cohn; Peter H Quail
Journal:  Mol Plant       Date:  2012-04-05       Impact factor: 13.164

4.  Branching of the PIF3 regulatory network in Arabidopsis: roles of PIF3-regulated MIDAs in seedling development in the dark and in response to light.

Authors:  Maria Sentandreu; Pablo Leivar; Guiomar Martín; Elena Monte
Journal:  Plant Signal Behav       Date:  2012-04-01

5.  Dynamic antagonism between phytochromes and PIF family basic helix-loop-helix factors induces selective reciprocal responses to light and shade in a rapidly responsive transcriptional network in Arabidopsis.

Authors:  Pablo Leivar; James M Tepperman; Megan M Cohn; Elena Monte; Bassem Al-Sady; Erika Erickson; Peter H Quail
Journal:  Plant Cell       Date:  2012-04-18       Impact factor: 11.277

Review 6.  Genomic basis for light control of plant development.

Authors:  Jigang Li; William Terzaghi; Xing Wang Deng
Journal:  Protein Cell       Date:  2012-03-17       Impact factor: 14.870

7.  A quartet of PIF bHLH factors provides a transcriptionally centered signaling hub that regulates seedling morphogenesis through differential expression-patterning of shared target genes in Arabidopsis.

Authors:  Yu Zhang; Oleg Mayba; Anne Pfeiffer; Hui Shi; James M Tepperman; Terence P Speed; Peter H Quail
Journal:  PLoS Genet       Date:  2013-01-31       Impact factor: 5.917

Review 8.  Light Perception: A Matter of Time.

Authors:  Sabrina E Sanchez; Matias L Rugnone; Steve A Kay
Journal:  Mol Plant       Date:  2020-02-14       Impact factor: 13.164

Review 9.  RAV genes: regulation of floral induction and beyond.

Authors:  Luis Matías-Hernández; Andrea E Aguilar-Jaramillo; Esther Marín-González; Paula Suárez-López; Soraya Pelaz
Journal:  Ann Bot       Date:  2014-05-08       Impact factor: 4.357

10.  Light-sensitive Phytochrome-Interacting Factors (PIFs) are not required to regulate phytoene synthase gene expression in the root.

Authors:  M Águila Ruiz-Sola; Antía Rodríguez-Villalón; Manuel Rodríguez-Concepción
Journal:  Plant Signal Behav       Date:  2014
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