Literature DB >> 15469819

Expansion and compression of a protein folding intermediate by GroEL.

Zong Lin1, Hays S Rye.   

Abstract

The GroEL-GroES chaperonin system is required for the assisted folding of many essential proteins. The precise nature of this assistance remains unclear, however. Here we show that denatured RuBisCO from Rhodospirillum rubrum populates a stable, nonaggregating, and kinetically trapped monomeric state at low temperature. Productive folding of this nonnative intermediate is fully dependent on GroEL, GroES, and ATP. Reactivation of the trapped RuBisCO monomer proceeds through a series of GroEL-induced structural rearrangements, as judged by resonance energy transfer measurements between the amino- and carboxy-terminal domains of RuBisCO. A general mechanism used by GroEL to push large, recalcitrant proteins like RuBisCO toward their native states thus appears to involve two steps: partial unfolding or rearrangement of a nonnative protein upon capture by a GroEL ring, followed by spatial constriction within the GroEL-GroES cavity that favors or enforces compact, folding-competent intermediate states.

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Year:  2004        PMID: 15469819      PMCID: PMC3759401          DOI: 10.1016/j.molcel.2004.09.003

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  48 in total

1.  Chaperonin function: folding by forced unfolding.

Authors:  M Shtilerman; G H Lorimer; S W Englander
Journal:  Science       Date:  1999-04-30       Impact factor: 47.728

Review 2.  Prion protein biology.

Authors:  S B Prusiner; M R Scott; S J DeArmond; F E Cohen
Journal:  Cell       Date:  1998-05-01       Impact factor: 41.582

3.  Transient aggregates in protein folding are easily mistaken for folding intermediates.

Authors:  M Silow; M Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

4.  The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex.

Authors:  Z Xu; A L Horwich; P B Sigler
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

5.  Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL.

Authors:  H S Rye; S G Burston; W A Fenton; J M Beechem; Z Xu; P B Sigler; A L Horwich
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

6.  Two conformational states of beta-lactamase bound to GroEL: a biophysical characterization.

Authors:  P Gervasoni; P Gehrig; A Plückthun
Journal:  J Mol Biol       Date:  1998-01-30       Impact factor: 5.469

7.  Design and characterization of a multisite fluorescence energy-transfer system for protein folding studies: a steady-state and time-resolved study of yeast phosphoglycerate kinase.

Authors:  M P Lillo; J M Beechem; B K Szpikowska; M A Sherman; M T Mas
Journal:  Biochemistry       Date:  1997-09-16       Impact factor: 3.162

8.  GroEL-GroES cycling: ATP and nonnative polypeptide direct alternation of folding-active rings.

Authors:  H S Rye; A M Roseman; S Chen; K Furtak; W A Fenton; H R Saibil; A L Horwich
Journal:  Cell       Date:  1999-04-30       Impact factor: 41.582

Review 9.  Structure and function in GroEL-mediated protein folding.

Authors:  P B Sigler; Z Xu; H S Rye; S G Burston; W A Fenton; A L Horwich
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

10.  The chaperonin GroEL binds to late-folding non-native conformations present in native Escherichia coli and murine dihydrofolate reductases.

Authors:  A C Clark; C Frieden
Journal:  J Mol Biol       Date:  1999-01-29       Impact factor: 5.469

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  38 in total

1.  Nuclear magnetic resonance spectroscopy with the stringent substrate rhodanese bound to the single-ring variant SR1 of the E. coli chaperonin GroEL.

Authors:  Eda Koculi; Reto Horst; Arthur L Horwich; Kurt Wüthrich
Journal:  Protein Sci       Date:  2011-07-07       Impact factor: 6.725

2.  Polypeptide in the chaperonin cage partly protrudes out and then folds inside or escapes outside.

Authors:  Fumihiro Motojima; Masasuke Yoshida
Journal:  EMBO J       Date:  2010-10-19       Impact factor: 11.598

Review 3.  First glimpses of a chaperonin-bound folding intermediate.

Authors:  Joanna F Swain; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-19       Impact factor: 11.205

Review 4.  GroEL-mediated protein folding: making the impossible, possible.

Authors:  Zong Lin; Hays S Rye
Journal:  Crit Rev Biochem Mol Biol       Date:  2006 Jul-Aug       Impact factor: 8.250

5.  GroEL stimulates protein folding through forced unfolding.

Authors:  Zong Lin; Damian Madan; Hays S Rye
Journal:  Nat Struct Mol Biol       Date:  2008-03-02       Impact factor: 15.369

Review 6.  Converging concepts of protein folding in vitro and in vivo.

Authors:  F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Nat Struct Mol Biol       Date:  2009-06       Impact factor: 15.369

7.  The cavity-chaperone Skp protects its substrate from aggregation but allows independent folding of substrate domains.

Authors:  Troy A Walton; Cristina M Sandoval; C Andrew Fowler; Arthur Pardi; Marcelo C Sousa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

8.  Repetitive protein unfolding by the trans ring of the GroEL-GroES chaperonin complex stimulates folding.

Authors:  Zong Lin; Jason Puchalla; Daniel Shoup; Hays S Rye
Journal:  J Biol Chem       Date:  2013-09-10       Impact factor: 5.157

9.  Chaperonin-mediated protein folding.

Authors:  Arthur L Horwich
Journal:  J Biol Chem       Date:  2013-06-26       Impact factor: 5.157

10.  Burst analysis spectroscopy: a versatile single-particle approach for studying distributions of protein aggregates and fluorescent assemblies.

Authors:  Jason Puchalla; Kelly Krantz; Robert Austin; Hays Rye
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-09       Impact factor: 11.205

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