Literature DB >> 15469235

Triggering DNAzymes with light: a photoactive C8 thioether-linked adenosine.

Richard Ting1, Leonard Lermer, David M Perrin.   

Abstract

Herein we report evidence for a light-inducible DNAzyme. In so doing, we also disclose the synthesis and photochemical properties of a novel nucleoside: 8-(2-(4-imidazolyl)ethyl-1-thio)-2'-deoxyriboadenosine (d1). The light sensitivity of (d1) was evaluated via an examination of the photoinduced reactivation of DNAzyme 8-17E from an inactive form that contained a single nucleotide (d1) modification. Restoration of DNAzyme activity results from a photoinduced reversion of (d1) to unmodified deoxyadenosine. Deuterium studies indicate that water is the source of hydrogen in the C8-H product and not the alkylthio group, suggesting that reversion of (1) to adenosine is not a consequence of simple homolysis of the C8-S bond but of an unprecedented photochemical conversion. This adenosine, which affords significant control of catalytic reactivation of a DNAzyme, may find general use in photodecaging other biological systems.

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Year:  2004        PMID: 15469235     DOI: 10.1021/ja046964y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

1.  Improved synthesis of the two-photon caging group 3-nitro-2-ethyldibenzofuran and its application to a caged thymidine phosphoramidite.

Authors:  Hrvoje Lusic; Rajendra Uprety; Alexander Deiters
Journal:  Org Lett       Date:  2010-03-05       Impact factor: 6.005

2.  Photochemical DNA activation.

Authors:  Hrvoje Lusic; Douglas D Young; Mark O Lively; Alexander Deiters
Journal:  Org Lett       Date:  2007-04-21       Impact factor: 6.005

3.  Light-triggered polymerase chain reaction.

Authors:  Douglas D Young; Wesleigh F Edwards; Hrvoje Lusic; Mark O Lively; Alexander Deiters
Journal:  Chem Commun (Camb)       Date:  2007-11-14       Impact factor: 6.222

4.  Photocaged DNAzymes as a general method for sensing metal ions in living cells.

Authors:  Kevin Hwang; Peiwen Wu; Taejin Kim; Lei Lei; Shiliang Tian; Yingxiao Wang; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2014-10-14       Impact factor: 15.336

5.  Synthesis, physicochemical properties, and hydrogen bonding of 4(5)-substituted 1-H-imidazole-2-carboxamide, a potential universal reader for DNA sequencing by recognition tunneling.

Authors:  Feng Liang; Shengqing Li; Stuart Lindsay; Peiming Zhang
Journal:  Chemistry       Date:  2012-03-29       Impact factor: 5.236

6.  Mismatch Discrimination and Efficient Photomodulation with Split 10-23 DNAzymes.

Authors:  Brittani K Ruble; Julia L Richards; Jasmina C Cheung-Lau; Ivan J Dmochowski
Journal:  Inorganica Chim Acta       Date:  2012-01-15       Impact factor: 2.545

7.  Turning the 10-23 DNAzyme on and off with light.

Authors:  Julia L Richards; Garry K Seward; Yu-Hsiu Wang; Ivan J Dmochowski
Journal:  Chembiochem       Date:  2010-02-15       Impact factor: 3.164

8.  RNA bandages for photoregulating in vitro protein synthesis.

Authors:  Julia L Richards; XinJing Tang; Anna Turetsky; Ivan J Dmochowski
Journal:  Bioorg Med Chem Lett       Date:  2008-09-30       Impact factor: 2.823

9.  Photochemical regulation of restriction endonuclease activity.

Authors:  Douglas D Young; Jeane M Govan; Mark O Lively; Alexander Deiters
Journal:  Chembiochem       Date:  2009-07-06       Impact factor: 3.164

10.  Optochemical control of deoxyoligonucleotide function via a nucleobase-caging approach.

Authors:  Qingyang Liu; Alexander Deiters
Journal:  Acc Chem Res       Date:  2013-08-28       Impact factor: 22.384

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