Literature DB >> 15448196

Metabolic profiling of the sink-to-source transition in developing leaves of quaking aspen.

Mijeong Lee Jeong1, Hongying Jiang, Huann-Sheng Chen, Chung-Jui Tsai, Scott A Harding.   

Abstract

Profiles of small polar metabolites from aspen (Populus tremuloides Michx.) leaves spanning the sink-to-source transition zone were compared. Approximately 25% of 250 to 300 routinely resolved peaks were identified, with carbohydrates, organic acids, and amino acids being most abundant. Two-thirds of identified metabolites exhibited greater than 4-fold changes in abundance during leaf ontogeny. In the context of photosynthetic and respiratory measurements, profile data yielded information consistent with expected developmental trends in carbon-heterotrophic and carbon-autotrophic metabolism. Suc concentration increased throughout leaf expansion, while hexose sugar concentrations peaked at mid-expansion and decreased sharply thereafter. Amino acid contents generally decreased during leaf expansion, but an early increase in Phe and a later one in Gly and Ser reflected growing commitments to secondary metabolism and photorespiration, respectively. The assimilation of nitrate and utilization of stored Asn appeared to be marked by sequential changes in malate concentration and Asn transaminase activity. Principal component and hierarchical clustering analysis facilitated the grouping of cell wall maturation (pectins, hemicelluloses, and oxalate) and membrane biogenesis markers in relation to developmental changes in carbon and nitrogen assimilation. Metabolite profiling will facilitate investigation of nitrogen use and cellular development in Populus sp. varying widely in their growth and pattern of carbon allocation during sink-to-source development and in response to stress.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15448196      PMCID: PMC523395          DOI: 10.1104/pp.104.044776

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  51 in total

1.  Technical advance: simultaneous analysis of metabolites in potato tuber by gas chromatography-mass spectrometry.

Authors:  U Roessner; C Wagner; J Kopka; R N Trethewey; L Willmitzer
Journal:  Plant J       Date:  2000-07       Impact factor: 6.417

2.  Co-association of cytochrome f catabolites and plastid-lipid-associated protein with chloroplast lipid particles.

Authors:  M D Smith; D D Licatalosi; J E Thompson
Journal:  Plant Physiol       Date:  2000-09       Impact factor: 8.340

3.  Characterization of plasma membrane domains enriched in lipid metabolites.

Authors:  E Madey; L M Nowack; L Su; Y Hong; K A Hudak; J E Thompson
Journal:  J Exp Bot       Date:  2001-04       Impact factor: 6.992

4.  Plants synthesize ethanolamine by direct decarboxylation of serine using a pyridoxal phosphate enzyme.

Authors:  D Rontein; I Nishida; G Tashiro; K Yoshioka; W I Wu; D R Voelker; G Basset; A D Hanson
Journal:  J Biol Chem       Date:  2001-07-18       Impact factor: 5.157

5.  Genotypic variation for condensed tannin production in trembling aspen (POPULUS TREMULOIDES, salicaceae) under elevated CO2 and in high- and low-fertility soil.

Authors:  J L Mansfield; P S Curtis; D R Zak; K S Pregitzer
Journal:  Am J Bot       Date:  1999-08       Impact factor: 3.844

6.  Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry.

Authors:  O Fiehn; J Kopka; R N Trethewey; L Willmitzer
Journal:  Anal Chem       Date:  2000-08-01       Impact factor: 6.986

7.  Measurement of subcellular metabolite levels in leaves by fractionation of freeze-stopped material in nonaqueous media.

Authors:  R Gerhardt; H W Heldt
Journal:  Plant Physiol       Date:  1984-07       Impact factor: 8.340

8.  Metabolite profiling for plant functional genomics.

Authors:  O Fiehn; J Kopka; P Dörmann; T Altmann; R N Trethewey; L Willmitzer
Journal:  Nat Biotechnol       Date:  2000-11       Impact factor: 54.908

9.  Cluster analysis and display of genome-wide expression patterns.

Authors:  M B Eisen; P T Spellman; P O Brown; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-08       Impact factor: 11.205

10.  Suppression subtractive hybridization-mediated transcriptome analysis from multiple tissues of aspen (Populus tremuloides) altered in phenylpropanoid metabolism.

Authors:  Priya Ranjan; Yu-Ying Kao; Hongying Jiang; Chandrashekhar P Joshi; Scott A Harding; Chung-Jui Tsai
Journal:  Planta       Date:  2004-05-14       Impact factor: 4.116

View more
  22 in total

1.  Metabolomic evaluation of pulsed electric field-induced stress on potato tissue.

Authors:  Federico Gómez Galindo; Petr Dejmek; Krister Lundgren; Allan G Rasmusson; António Vicente; Thomas Moritz
Journal:  Planta       Date:  2009-06-04       Impact factor: 4.116

2.  A core set of metabolite sink/source ratios indicative for plant organ productivity in Lotus japonicus.

Authors:  Thomas Fester; Ingo Fetzer; Claus Härtig
Journal:  Planta       Date:  2012-09-21       Impact factor: 4.116

3.  Developmentally controlled farnesylation modulates AtNAP1;1 function in cell proliferation and cell expansion during Arabidopsis leaf development.

Authors:  Arnaud Galichet; Wilhelm Gruissem
Journal:  Plant Physiol       Date:  2006-10-13       Impact factor: 8.340

4.  Constitutively elevated salicylic acid levels alter photosynthesis and oxidative state but not growth in transgenic populus.

Authors:  Liang-Jiao Xue; Wenbing Guo; Yinan Yuan; Edward O Anino; Batbayar Nyamdari; Mark C Wilson; Christopher J Frost; Han-Yi Chen; Benjamin A Babst; Scott A Harding; Chung-Jui Tsai
Journal:  Plant Cell       Date:  2013-07-31       Impact factor: 11.277

5.  Water and salinity stress in grapevines: early and late changes in transcript and metabolite profiles.

Authors:  Grant R Cramer; Ali Ergül; Jerome Grimplet; Richard L Tillett; Elizabeth A R Tattersall; Marlene C Bohlman; Delphine Vincent; Justin Sonderegger; Jason Evans; Craig Osborne; David Quilici; Karen A Schlauch; David A Schooley; John C Cushman
Journal:  Funct Integr Genomics       Date:  2006-11-29       Impact factor: 3.410

6.  Metabolic profiling reveals local and systemic responses of host plants to nematode parasitism.

Authors:  Julia Hofmann; Abd El Naser El Ashry; Shahbaz Anwar; Alexander Erban; Joachim Kopka; Florian Grundler
Journal:  Plant J       Date:  2010-03-31       Impact factor: 6.417

7.  A Journey Through a Leaf: Phenomics Analysis of Leaf Growth in Arabidopsis thaliana.

Authors:  Hannes Vanhaeren; Nathalie Gonzalez; Dirk Inzé
Journal:  Arabidopsis Book       Date:  2015-07-22

8.  Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis.

Authors:  Mutsumi Watanabe; Salma Balazadeh; Takayuki Tohge; Alexander Erban; Patrick Giavalisco; Joachim Kopka; Bernd Mueller-Roeber; Alisdair R Fernie; Rainer Hoefgen
Journal:  Plant Physiol       Date:  2013-05-21       Impact factor: 8.340

9.  Quantitative metabolomics based on gas chromatography mass spectrometry: status and perspectives.

Authors:  Maud M Koek; Renger H Jellema; Jan van der Greef; Albert C Tas; Thomas Hankemeier
Journal:  Metabolomics       Date:  2010-11-16       Impact factor: 4.290

10.  The tonoplast-localized sucrose transporter in Populus (PtaSUT4) regulates whole-plant water relations, responses to water stress, and photosynthesis.

Authors:  Christopher J Frost; Batbayar Nyamdari; Chung-Jui Tsai; Scott A Harding
Journal:  PLoS One       Date:  2012-08-31       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.