Literature DB >> 22996195

A core set of metabolite sink/source ratios indicative for plant organ productivity in Lotus japonicus.

Thomas Fester1, Ingo Fetzer, Claus Härtig.   

Abstract

Plant growth is an important process in physiological as well as ecological respect and a number of metabolic parameters (elemental ratios as well as steady-state levels of individual metabolites) have been demonstrated to reflect this process on the whole plant level. Since plant growth is highly localized and is the result of a complex interplay of metabolic activities in sink and source organs, we propose that ratios in metabolite levels of sink and source organs are particularly well suited to characterize this process. To demonstrate such a connection, we studied organ-specific metabolite ratios from Lotus japonicus treated with mineral nutrients, salt stress or arbuscular mycorrhizal fungi. The plants were displaying a wide range of biomass and of flower/biomass ratios. In the analysis of our data we looked for correlations between shifts in sink/source metabolite ratios and plant productivity (biomass accumulated at the time of harvest). In addition we correlated shifts in metabolite ratios comparing competing generative and vegetative sink organs with shifts in productivity of the two organs (changes in flower/biomass ratios). In our analyses we observed clear shifts of carbohydrates and of compounds connected to nitrogen metabolism in favour of sink organs of particularly high productivity. These shifts were in agreement with general differences in metabolite steady-state levels when comparing sink and source organs. Our findings suggest that differentiation of sink and source organs during sampling for metabolomic experiments substantially increases the amount of information obtained from such experiments.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22996195     DOI: 10.1007/s00425-012-1759-y

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  26 in total

1.  Strong relationship between elemental stoichiometry and metabolome in plants.

Authors:  Albert Rivas-Ubach; Jordi Sardans; Miriam Pérez-Trujillo; Marc Estiarte; Josep Peñuelas
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

Review 2.  Functional dynamics of plant growth and photosynthesis--from steady-state to dynamics--from homogeneity to heterogeneity.

Authors:  U Schurr; A Walter; U Rascher
Journal:  Plant Cell Environ       Date:  2006-03       Impact factor: 7.228

3.  Integrative functional genomics of salt acclimatization in the model legume Lotus japonicus.

Authors:  Diego H Sanchez; Felix Lippold; Henning Redestig; Matthew A Hannah; Alexander Erban; Ute Krämer; Joachim Kopka; Michael K Udvardi
Journal:  Plant J       Date:  2007-11-29       Impact factor: 6.417

4.  TagFinder for the quantitative analysis of gas chromatography--mass spectrometry (GC-MS)-based metabolite profiling experiments.

Authors:  Alexander Luedemann; Katrin Strassburg; Alexander Erban; Joachim Kopka
Journal:  Bioinformatics       Date:  2008-01-19       Impact factor: 6.937

Review 5.  Uptake and partitioning of amino acids and peptides.

Authors:  Mechthild Tegeder; Doris Rentsch
Journal:  Mol Plant       Date:  2010-11-16       Impact factor: 13.164

6.  Sucrose: metabolite and signaling molecule.

Authors:  Julia Wind; Sjef Smeekens; Johannes Hanson
Journal:  Phytochemistry       Date:  2010-08-07       Impact factor: 4.072

7.  Profiles of purine biosynthesis, salvage and degradation in disks of potato (Solanum tuberosum L.) tubers.

Authors:  Riko Katahira; Hiroshi Ashihara
Journal:  Planta       Date:  2006-07-15       Impact factor: 4.116

8.  Nitrogen-assimilating enzymes in land plants and algae: phylogenic and physiological perspectives.

Authors:  Ritsuko Inokuchi; Kei-Ichi Kuma; Takashi Miyata; Mitsumasa Okada
Journal:  Physiol Plant       Date:  2002-09       Impact factor: 4.500

9.  Biomarker metabolites capturing the metabolite variance present in a rice plant developmental period.

Authors:  Lee Tarpley; Anthony L Duran; Tesfamichael H Kebrom; Lloyd W Sumner
Journal:  BMC Plant Biol       Date:  2005-05-31       Impact factor: 4.215

10.  A functional analysis of the pyrimidine catabolic pathway in Arabidopsis.

Authors:  Rita Zrenner; Heike Riegler; Cathleen R Marquard; Peter R Lange; Claudia Geserick; Caren E Bartosz; Celine T Chen; Robert D Slocum
Journal:  New Phytol       Date:  2009-04-29       Impact factor: 10.151

View more
  2 in total

1.  Iron partitioning at an early growth stage impacts iron deficiency responses in soybean plants (Glycine max L.).

Authors:  Carla S Santos; Mariana Roriz; Susana M P Carvalho; Marta W Vasconcelos
Journal:  Front Plant Sci       Date:  2015-05-12       Impact factor: 5.753

2.  Rhizosphere Protists Change Metabolite Profiles in Zea mays.

Authors:  Anke Kuppardt; Thomas Fester; Claus Härtig; Antonis Chatzinotas
Journal:  Front Microbiol       Date:  2018-05-03       Impact factor: 5.640

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.