Literature DB >> 15371329

A single Argonaute protein mediates both transcriptional and posttranscriptional silencing in Schizosaccharomyces pombe.

Alla Sigova1, Nicholas Rhind, Phillip D Zamore.   

Abstract

The Schizosaccharomyces pombe genome encodes only one of each of the three major classes of proteins implicated in RNA silencing: Dicer (Dcr1), RNA-dependent RNA polymerase (RdRP; Rdp1), and Argonaute (Ago1). These three proteins are required for silencing at centromeres and for the initiation of transcriptionally silent heterochromatin at the mating-type locus. Here, we show that the introduction of a double-stranded RNA (dsRNA) hairpin corresponding to a green fluorescent protein (GFP) transgene triggers classical RNA interference (RNAi) in S. pombe. That is, GFP silencing triggered by dsRNA reflects a change in the steady-state concentration of GFP mRNA, but not in the rate of GFP transcription. RNAi in S. pombe requires dcr1, rdp1, and ago1, but does not require chp1, tas3, or swi6, genes required for transcriptional silencing. Thus, the RNAi machinery in S. pombe can direct both transcriptional and posttranscriptional silencing using a single Dicer, RdRP, and Argonaute protein. Our findings suggest that these three proteins fulfill a common biochemical function in distinct siRNA-directed silencing pathways. Copyright 2004 Cold Spring Harbor Laboratory Press

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Year:  2004        PMID: 15371329      PMCID: PMC522986          DOI: 10.1101/gad.1218004

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  56 in total

1.  Establishment and maintenance of a heterochromatin domain.

Authors:  Ira M Hall; Gurumurthy D Shankaranarayana; Ken-Ichi Noma; Nabieh Ayoub; Amikam Cohen; Shiv I S Grewal
Journal:  Science       Date:  2002-09-05       Impact factor: 47.728

2.  RNAi is activated during Drosophila oocyte maturation in a manner dependent on aubergine and spindle-E.

Authors:  Jason R Kennerdell; Shinji Yamaguchi; Richard W Carthew
Journal:  Genes Dev       Date:  2002-08-01       Impact factor: 11.361

3.  Isolation of quelling-defective (qde) mutants impaired in posttranscriptional transgene-induced gene silencing in Neurospora crassa.

Authors:  C Cogoni; G Macino
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

4.  Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena.

Authors:  Kazufumi Mochizuki; Noah A Fine; Toshitaka Fujisawa; Martin A Gorovsky
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

5.  ARGONAUTE1 is required for efficient RNA interference in Drosophila embryos.

Authors:  Robert W Williams; Gerald M Rubin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

6.  Single-stranded antisense siRNAs guide target RNA cleavage in RNAi.

Authors:  Javier Martinez; Agnieszka Patkaniowska; Henning Urlaub; Reinhard Lührmann; Thomas Tuschl
Journal:  Cell       Date:  2002-09-06       Impact factor: 41.582

7.  PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans.

Authors:  Marcel Tijsterman; Kristy L Okihara; Karen Thijssen; Ronald H A Plasterk
Journal:  Curr Biol       Date:  2002-09-03       Impact factor: 10.834

8.  ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation.

Authors:  Daniel Zilberman; Xiaofeng Cao; Steven E Jacobsen
Journal:  Science       Date:  2003-01-09       Impact factor: 47.728

9.  A microRNA in a multiple-turnover RNAi enzyme complex.

Authors:  György Hutvágner; Phillip D Zamore
Journal:  Science       Date:  2002-08-01       Impact factor: 47.728

10.  Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.

Authors:  Thomas A Volpe; Catherine Kidner; Ira M Hall; Grace Teng; Shiv I S Grewal; Robert A Martienssen
Journal:  Science       Date:  2002-08-22       Impact factor: 47.728

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  58 in total

Review 1.  Post-transcriptional gene silencing, transcriptional gene silencing and human immunodeficiency virus.

Authors:  Catalina Méndez; Chantelle L Ahlenstiel; Anthony D Kelleher
Journal:  World J Virol       Date:  2015-08-12

2.  RNA-dependent RNA polymerase is an essential component of a self-enforcing loop coupling heterochromatin assembly to siRNA production.

Authors:  Tomoyasu Sugiyama; Hugh Cam; André Verdel; Danesh Moazed; Shiv I S Grewal
Journal:  Proc Natl Acad Sci U S A       Date:  2004-12-22       Impact factor: 11.205

Review 3.  Exploring the functions of RNA interference pathway proteins: some functions are more RISCy than others?

Authors:  Katarzyna Jaronczyk; Jon B Carmichael; Tom C Hobman
Journal:  Biochem J       Date:  2005-05-01       Impact factor: 3.857

4.  A potential link between transgene silencing and poly(A) tails.

Authors:  Mikiko C Siomi; Hiroko Tsukumo; Akira Ishizuka; Tomoko Nagami; Haruhiko Siomi
Journal:  RNA       Date:  2005-07       Impact factor: 4.942

Review 5.  On the origin and functions of RNA-mediated silencing: from protists to man.

Authors:  Heriberto Cerutti; J Armando Casas-Mollano
Journal:  Curr Genet       Date:  2006-05-12       Impact factor: 3.886

Review 6.  Small RNAs, big impact: small RNA pathways in transposon control and their effect on the host stress response.

Authors:  Bayly S Wheeler
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

7.  Analysis of small RNA in fission yeast; centromeric siRNAs are potentially generated through a structured RNA.

Authors:  Ingela Djupedal; Isabelle C Kos-Braun; Rebecca A Mosher; Niklas Söderholm; Femke Simmer; Thomas J Hardcastle; Aurélie Fender; Nadja Heidrich; Alexander Kagansky; Elizabeth Bayne; E Gerhart H Wagner; David C Baulcombe; Robin C Allshire; Karl Ekwall
Journal:  EMBO J       Date:  2009-12-16       Impact factor: 11.598

8.  Silencing in trans: position matters in fission yeast.

Authors:  Monika Gullerova; Nick J Proudfoot
Journal:  EMBO Rep       Date:  2010-02-12       Impact factor: 8.807

Review 9.  Phylogenetic comparison of small RNA-triggered transcriptional gene silencing.

Authors:  Xizhe Zhang; John J Rossi
Journal:  J Biol Chem       Date:  2011-07-05       Impact factor: 5.157

10.  RNA interference (RNAi)-dependent and RNAi-independent association of the Chp1 chromodomain protein with distinct heterochromatic loci in fission yeast.

Authors:  Victoria J Petrie; Jeffrey D Wuitschick; Cheryl D Givens; Aaron M Kosinski; Janet F Partridge
Journal:  Mol Cell Biol       Date:  2005-03       Impact factor: 4.272

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