Literature DB >> 15845026

Exploring the functions of RNA interference pathway proteins: some functions are more RISCy than others?

Katarzyna Jaronczyk1, Jon B Carmichael, Tom C Hobman.   

Abstract

PPD (PAZ Piwi domain) proteins and the Dicer family have been the subjects of intense study over the last 6 years. These proteins have well-established roles in RNAi (RNA interference), a process that relies on siRNAs (small interfering RNAs) or miRNAs (microRNAs) to mediate specificity. The development of techniques for applying RNAi as a laboratory tool and a molecular therapeutic technique has rapidly outpaced our understanding of the biology of this process. However, over the last 2 years, great strides have been made towards elucidating how PPD proteins and Dicer regulate gene-silencing at the pre- and post-transcriptional levels. In addition, evidence is beginning to emerge that suggests that these proteins have additional siRNA-independent roles as cell-cycle regulators. In the present review, we summarize the well-known roles of these two classes of proteins in gene-silencing pathways, as well as explore the evidence for novel roles of PPD and Dicer proteins.

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Year:  2005        PMID: 15845026      PMCID: PMC1134985          DOI: 10.1042/BJ20041822

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  159 in total

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Authors:  Michelle A Carmell; Zhenyu Xuan; Michael Q Zhang; Gregory J Hannon
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Authors:  Yan Zeng; Rui Yi; Bryan R Cullen
Journal:  Proc Natl Acad Sci U S A       Date:  2003-08-05       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-13       Impact factor: 11.205

4.  Evidence that siRNAs function as guides, not primers, in the Drosophila and human RNAi pathways.

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Journal:  Mol Cell       Date:  2002-09       Impact factor: 17.970

5.  Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena.

Authors:  Kazufumi Mochizuki; Noah A Fine; Toshitaka Fujisawa; Martin A Gorovsky
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

6.  De novo deletion 12q: report of a patient with 12q24.31q24.33 deletion.

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7.  Patched1 interacts with cyclin B1 to regulate cell cycle progression.

Authors:  E A Barnes; M Kong; V Ollendorff; D J Donoghue
Journal:  EMBO J       Date:  2001-05-01       Impact factor: 11.598

8.  Short-interfering-RNA-mediated gene silencing in mammalian cells requires Dicer and eIF2C translation initiation factors.

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Journal:  Curr Biol       Date:  2003-01-08       Impact factor: 10.834

9.  Dicer is essential for mouse development.

Authors:  Emily Bernstein; Sang Yong Kim; Michelle A Carmell; Elizabeth P Murchison; Heather Alcorn; Mamie Z Li; Alea A Mills; Stephen J Elledge; Kathryn V Anderson; Gregory J Hannon
Journal:  Nat Genet       Date:  2003-10-05       Impact factor: 38.330

10.  Zebrafish vasa RNA but not its protein is a component of the germ plasm and segregates asymmetrically before germline specification.

Authors:  H Knaut; F Pelegri; K Bohmann; H Schwarz; C Nüsslein-Volhard
Journal:  J Cell Biol       Date:  2000-05-15       Impact factor: 10.539

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  14 in total

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2.  MIWI associates with translational machinery and PIWI-interacting RNAs (piRNAs) in regulating spermatogenesis.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-24       Impact factor: 11.205

3.  Up-regulation of dicer, a component of the MicroRNA machinery, in prostate adenocarcinoma.

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Journal:  Am J Pathol       Date:  2006-11       Impact factor: 4.307

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5.  Identification of Piwil2-like (PL2L) proteins that promote tumorigenesis.

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Journal:  PLoS One       Date:  2010-10-20       Impact factor: 3.240

6.  Dendronized gold nanoparticles for siRNA delivery.

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7.  Hsp90 regulates the function of argonaute 2 and its recruitment to stress granules and P-bodies.

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Journal:  Mol Biol Cell       Date:  2009-05-20       Impact factor: 4.138

8.  Schistosoma mansoni: the dicer gene and its expression.

Authors:  Greice Krautz-Peterson; Patrick J Skelly
Journal:  Exp Parasitol       Date:  2007-07-19       Impact factor: 2.011

9.  Lost and Found: Piwi and Argonaute Pathways in Flatworms.

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10.  Computational analysis of siRNA recognition by the Ago2 PAZ domain and identification of the determinants of RNA-induced gene silencing.

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Journal:  PLoS One       Date:  2013-02-18       Impact factor: 3.240

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