Literature DB >> 28435966

Water structuring above solutes with planar hydrophobic surfaces.

Udo Schnupf1, John W Brady.   

Abstract

Many important biological solutes possess not only polar and hydrogen bonding functionalities, but also weakly-hydrating, or hydrophobic, surfaces. Theories of the hydration of such surfaces predict that their solvent interactions will change from a wetting type interaction to a dewetting regime as a function of the solute size, with a gradual transition in behavior taking place around characteristic lengths of ∼1 nm. Aggregations of non-polar species over this size range will undergo a transition from being dominated by entropy to being dominated by enthalpy. These transitions can be understood in part in terms of the geometries required of the solvating water molecules. We report here a series of simulations in aqueous solution of organic molecules with planar faces of increasing size, ranging from cyclopropane to circumcircumcoronene, in order to explore the transition in behavior for such solutes as their size increases. For this series, the dewetting transition occurred gradually, converging asymptotically to a limiting separation value for first layer water molecules of around 3.3 Å, while the transition in hydrogen bonding orientational structure occurred between cyclopropane and cyclopentadene. Water immediately adjacent to the largest planar hydrophobic surfaces oriented in ways that resembled on average the structural organization of the basal planes of ice.

Entities:  

Year:  2017        PMID: 28435966      PMCID: PMC5538563          DOI: 10.1039/c7cp00179g

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  28 in total

Review 1.  Weakly hydrated surfaces and the binding interactions of small biological solutes.

Authors:  John W Brady; Letizia Tavagnacco; Laurent Ehrlich; Mo Chen; Udo Schnupf; Michael E Himmel; Marie-Louise Saboungi; Attilio Cesàro
Journal:  Eur Biophys J       Date:  2011-11-29       Impact factor: 1.733

2.  Observation of a dewetting transition in the collapse of the melittin tetramer.

Authors:  Pu Liu; Xuhui Huang; Ruhong Zhou; B J Berne
Journal:  Nature       Date:  2005-09-01       Impact factor: 49.962

3.  The dewetting transition and the hydrophobic effect.

Authors:  Niharendu Choudhury; B Montgomery Pettitt
Journal:  J Am Chem Soc       Date:  2007-03-27       Impact factor: 15.419

Review 4.  CHARMM: the biomolecular simulation program.

Authors:  B R Brooks; C L Brooks; A D Mackerell; L Nilsson; R J Petrella; B Roux; Y Won; G Archontis; C Bartels; S Boresch; A Caflisch; L Caves; Q Cui; A R Dinner; M Feig; S Fischer; J Gao; M Hodoscek; W Im; K Kuczera; T Lazaridis; J Ma; V Ovchinnikov; E Paci; R W Pastor; C B Post; J Z Pu; M Schaefer; B Tidor; R M Venable; H L Woodcock; X Wu; W Yang; D M York; M Karplus
Journal:  J Comput Chem       Date:  2009-07-30       Impact factor: 3.376

5.  Temperature dependence of dimerization and dewetting of large-scale hydrophobes: a molecular dynamics study.

Authors:  Ronen Zangi; B J Berne
Journal:  J Phys Chem B       Date:  2008-06-26       Impact factor: 2.991

6.  Canonical dynamics: Equilibrium phase-space distributions.

Authors: 
Journal:  Phys Rev A Gen Phys       Date:  1985-03

7.  Glucose interactions with a model peptide.

Authors:  Phillip E Mason; Adrien Lerbret; Marie-Louise Saboungi; George W Neilson; Christopher E Dempsey; John W Brady
Journal:  Proteins       Date:  2011-05-13

8.  Free energy surfaces for the interaction of D-glucose with planar aromatic groups in aqueous solution.

Authors:  Jakob Wohlert; Udo Schnupf; John W Brady
Journal:  J Chem Phys       Date:  2010-10-21       Impact factor: 3.488

Review 9.  Double helical DNA: conformations, physical properties, and interactions with ligands.

Authors:  M T Record; S J Mazur; P Melançon; J H Roe; S L Shaner; L Unger
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

10.  Effect of solute size and solute-water attractive interactions on hydration water structure around hydrophobic solutes.

Authors:  H S Ashbaugh; M E Paulaitis
Journal:  J Am Chem Soc       Date:  2001-10-31       Impact factor: 15.419

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  1 in total

1.  Insignificant Effect of Temperature on the Structure and Angular Jumps of Water near a Hydrophobic Cation.

Authors:  Adyasa Priyadarsini; Bhabani S Mallik
Journal:  ACS Omega       Date:  2021-03-19
  1 in total

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