Literature DB >> 19905022

Ultrafast vibrational spectroscopy of a degenerate mode of guanidinium chloride.

Dmitriy Yu Vorobyev1, Chun-Hung Kuo, Jian-Xin Chen, Daniel G Kuroda, J Nathan Scott, Jane M Vanderkooi, Robin M Hochstrasser.   

Abstract

Nearly degenerate asymmetric stretches with perpendicular transition dipole moments of the deuterated guanidinium cation (DGdm(+)) in D(2)O and D-glycerol/D(2)O mixtures at 1600 cm(-1) were investigated by linear FTIR spectroscopy and polarization dependent femtosecond pump-probe spectroscopy. The vibrational coupling of the asymmetric stretches of guanidinium occurs within 0.5 ps and leads to fast decay of the anisotropy to a level of 0.1. A systematic study of the influence of the coherence transfer on pump-probe signals is given. Following this decay, the anisotropy decays with a time constant of 4.1 ps in D(2)O by rotational diffusion about an axis perpendicular to the DGdm(+) mean plane. The presence of aggregation was demonstrated for concentrations higher than 0.2 M.

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Year:  2009        PMID: 19905022      PMCID: PMC2785230          DOI: 10.1021/jp9069256

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  29 in total

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6.  Molecular basis for the effect of urea and guanidinium chloride on the dynamics of unfolded polypeptide chains.

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7.  Guanidinium chloride induction of partial unfolding in amide proton exchange in RNase A.

Authors:  S L Mayo; R L Baldwin
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Authors:  Gerald M Sando; Q Zhong; J C Owrutsky
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  12 in total

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2.  Water-induced relaxation of a degenerate vibration of guanidinium using 2D IR echo spectroscopy.

Authors:  Dmitriy Yu Vorobyev; Chun-Hung Kuo; Daniel G Kuroda; J Nathan Scott; Jane M Vanderkooi; Robin M Hochstrasser
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3.  Ultrafast relaxation and 2D IR of the aqueous trifluorocarboxylate ion.

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Journal:  J Chem Phys       Date:  2010-01-28       Impact factor: 3.488

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5.  Two-dimensional infrared spectral signature and hydration of the oxalate dianion.

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Review 9.  Role of solvation effects in protein denaturation: from thermodynamics to single molecules and back.

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10.  Vibrational dynamics of a non-degenerate ultrafast rotor: the (C12,C13)-oxalate ion.

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Journal:  J Chem Phys       Date:  2013-10-28       Impact factor: 3.488

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