Literature DB >> 15333951

Optimum solubility (OS) screening: an efficient method to optimize buffer conditions for homogeneity and crystallization of proteins.

Jarmila Jancarik1, Ramona Pufan, Connie Hong, Sung Hou Kim, Rosalind Kim.   

Abstract

One of the most critical steps in the preparation of protein samples for structural studies by X-ray crystallography is to obtain biochemically pure and conformationally homogenous protein samples. Very often, the purified sample does not meet these qualifications and therefore does not crystallize. A screening method, Optimum Solubility Screen, has been developed that consists of two steps. The first step selects a better buffer than that used during purification. 24 different buffers ranging from pH 3 to pH 10 are screened using a vapor-diffusion method and very small amounts of protein. The solubility of the protein is first determined by visual examination using a light microscope and those drops that remain clear after 24 h are further evaluated using dynamic light scattering. If the results from the first step are still not satisfactory, a second step explores a variety of chemical additives in order to improve the monodispersity of the protein sample. In 64% of the cases, crystallization was successful from proteins that had initially shown high levels of aggregation. This screen can be configured to perform in an automated high-throughput mode and can be expanded for additional buffers and additives.

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Year:  2004        PMID: 15333951     DOI: 10.1107/S0907444904010972

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  39 in total

1.  Crystallization and preliminary X-ray diffraction studies of the GhKCH2 motor domain: alteration of pH significantly improved the quality of the crystals.

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Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-06-28

2.  Alternatively expressed domains of AU-rich element RNA-binding protein 1 (AUF1) regulate RNA-binding affinity, RNA-induced protein oligomerization, and the local conformation of bound RNA ligands.

Authors:  Beth E Zucconi; Jeff D Ballin; Brandy Y Brewer; Christina R Ross; Jun Huang; Eric A Toth; Gerald M Wilson
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

3.  In situ X-ray data collection and structure phasing of protein crystals at Structural Biology Center 19-ID.

Authors:  Karolina Michalska; Kemin Tan; Changsoo Chang; Hui Li; Catherine Hatzos-Skintges; Michael Molitsky; Randy Alkire; Andrzej Joachimiak
Journal:  J Synchrotron Radiat       Date:  2015-10-15       Impact factor: 2.616

4.  Formulation screening by differential scanning fluorimetry: how often does it work?

Authors:  Marko Ristic; Nicholas Rosa; Shane A Seabrook; Janet Newman
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-09-23       Impact factor: 1.056

5.  Paramecium bursaria chlorella virus 1 encodes a polyamine acetyltransferase.

Authors:  Zachary Charlop-Powers; Jean Jakoncic; James R Gurnon; James L Van Etten; Ming-Ming Zhou
Journal:  J Biol Chem       Date:  2012-01-25       Impact factor: 5.157

6.  Crystallization of hepatocyte nuclear factor 1beta in complex with DNA.

Authors:  Peng Lu; Yun Li; Amanda Gorman; Young-In Chi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-05

7.  Cross-crystallization method used for the crystallization and preliminary diffraction analysis of a novel di-haem cytochrome c4.

Authors:  Ivana Tomcová; Rui Miguel Mamede Branca; Gabriella Bodó; Csaba Bagyinka; Ivana Kutá Smatanová
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-07-26

8.  Specific protein domains mediate cooperative assembly of HuR oligomers on AU-rich mRNA-destabilizing sequences.

Authors:  Elizabeth J Fialcowitz-White; Brandy Y Brewer; Jeff D Ballin; Chris D Willis; Eric A Toth; Gerald M Wilson
Journal:  J Biol Chem       Date:  2007-05-21       Impact factor: 5.157

9.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of DsrEFH from Allochromatium vinosum.

Authors:  Christiane Dahl; Andrea Schulte; Dong Hae Shin
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-09-29

10.  Crystallization Optimum Solubility Screening: using crystallization results to identify the optimal buffer for protein crystal formation.

Authors:  Bernard Collins; Raymond C Stevens; Rebecca Page
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-11-05
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