Literature DB >> 15288937

Theoretical analysis of dynamic force spectroscopy experiments on ligand-receptor complexes.

M Raible1, M Evstigneev, P Reimann, F W Bartels, R Ros.   

Abstract

The forced rupture of single chemical bonds in biomolecular compounds (e.g. ligand-receptor systems) as observed in dynamic force spectroscopy experiments is addressed. Under the assumption that the probability of bond rupture depends only on the instantaneously acting force, a data collapse onto a single master curve is predicted. For rupture data obtained experimentally by dynamic AFM force spectroscopy of a ligand-receptor bond between a DNA and a regulatory protein we do not find such a collapse. We conclude that the above mentioned, generally accepted assumption is not satisfied and we discuss possible explanations.

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Year:  2004        PMID: 15288937     DOI: 10.1016/j.jbiotec.2004.04.017

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  13 in total

1.  Long lifetime of hydrogen-bonded DNA basepairs by force spectroscopy.

Authors:  Alexander Fuhrmann; Sebastian Getfert; Qiang Fu; Peter Reimann; Stuart Lindsay; Robert Ros
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

2.  Antibody-unfolding and metastable-state binding in force spectroscopy and recognition imaging.

Authors:  Parminder Kaur; Alexander Fuhrmann; Robert Ros; Linda Obenauer Kutner; Lumelle A Schneeweis; Ryman Navoa; Kirby Steger; Lei Xie; Christopher Yonan; Ralph Abraham; Michael J Grace; Stuart Lindsay
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

3.  Force spectroscopy of single multidomain biopolymers: a master equation approach.

Authors:  O Braun; U Seifert
Journal:  Eur Phys J E Soft Matter       Date:  2005-09-20       Impact factor: 1.890

4.  The solution to the streptavidin-biotin paradox: the influence of history on the strength of single molecular bonds.

Authors:  Frédéric Pincet; Julien Husson
Journal:  Biophys J       Date:  2005-09-16       Impact factor: 4.033

5.  Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of DNA hairpins.

Authors:  Olga K Dudko; Jérôme Mathé; Attila Szabo; Amit Meller; Gerhard Hummer
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

6.  Theoretical analysis of single-molecule force spectroscopy experiments: heterogeneity of chemical bonds.

Authors:  M Raible; M Evstigneev; F W Bartels; R Eckel; M Nguyen-Duong; R Merkel; R Ros; D Anselmetti; P Reimann
Journal:  Biophys J       Date:  2006-03-02       Impact factor: 4.033

7.  Theory, analysis, and interpretation of single-molecule force spectroscopy experiments.

Authors:  Olga K Dudko; Gerhard Hummer; Attila Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-13       Impact factor: 11.205

8.  Nanopore force spectroscopy of aptamer-ligand complexes.

Authors:  Vera Arnaut; Martin Langecker; Friedrich C Simmel
Journal:  Biophys J       Date:  2013-09-03       Impact factor: 4.033

9.  Quantitative analysis of single-molecule RNA-protein interaction.

Authors:  Alexander Fuhrmann; Jan C Schoening; Dario Anselmetti; Dorothee Staiger; Robert Ros
Journal:  Biophys J       Date:  2009-06-17       Impact factor: 4.033

10.  Plasticity of hydrogen bond networks regulates mechanochemistry of cell adhesion complexes.

Authors:  Shaon Chakrabarti; Michael Hinczewski; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2014-06-09       Impact factor: 11.205

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