Literature DB >> 24927549

Plasticity of hydrogen bond networks regulates mechanochemistry of cell adhesion complexes.

Shaon Chakrabarti1, Michael Hinczewski1, D Thirumalai2.   

Abstract

Mechanical forces acting on cell adhesion receptor proteins regulate a range of cellular functions by formation and rupture of noncovalent interactions with ligands. Typically, force decreases the lifetimes of intact complexes ("slip bonds"), making the discovery that these lifetimes can also be prolonged ("catch bonds") a surprise. We created a microscopic analytic theory by incorporating the structures of selectin and integrin receptors into a conceptual framework based on the theory of stochastic equations, which quantitatively explains a wide range of experimental data (including catch bonds at low forces and slip bonds at high forces). Catch bonds arise due to force-induced remodeling of hydrogen bond networks, a finding that also accounts for unbinding in structurally unrelated integrin-fibronectin and actomyosin complexes. For the selectin family, remodeling of hydrogen bond networks drives an allosteric transition resulting in the formation of the maximum number of hydrogen bonds determined only by the structure of the receptor and independent of the ligand. A similar transition allows us to predict the increase in the number of hydrogen bonds in a particular allosteric state of α5β1 integrin-fibronectin complex, a conformation which is yet to be crystallized. We also make a testable prediction that a single point mutation (Tyr51Phe) in the ligand associated with selectin should dramatically alter the nature of the catch bond compared with the wild type. Our work suggests that nature uses a ductile network of hydrogen bonds to engineer function over a broad range of forces.

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Year:  2014        PMID: 24927549      PMCID: PMC4078813          DOI: 10.1073/pnas.1405384111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Insights into the molecular basis of leukocyte tethering and rolling revealed by structures of P- and E-selectin bound to SLe(X) and PSGL-1.

Authors:  W S Somers; J Tang; G D Shaw; R T Camphausen
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

2.  Direct observation of catch bonds involving cell-adhesion molecules.

Authors:  Bryan T Marshall; Mian Long; James W Piper; Tadayuki Yago; Rodger P McEver; Cheng Zhu
Journal:  Nature       Date:  2003-05-08       Impact factor: 49.962

Review 3.  Approaches to the description and prediction of the binding affinity of small-molecule ligands to macromolecular receptors.

Authors:  Holger Gohlke; Gerhard Klebe
Journal:  Angew Chem Int Ed Engl       Date:  2002-08-02       Impact factor: 15.336

4.  Electron cryo-microscopy shows how strong binding of myosin to actin releases nucleotide.

Authors:  Kenneth C Holmes; Isabel Angert; F Jon Kull; Werner Jahn; Rasmus R Schröder
Journal:  Nature       Date:  2003-09-25       Impact factor: 49.962

5.  Theoretical analysis of dynamic force spectroscopy experiments on ligand-receptor complexes.

Authors:  M Raible; M Evstigneev; P Reimann; F W Bartels; R Ros
Journal:  J Biotechnol       Date:  2004-08-26       Impact factor: 3.307

6.  Catch bond-like kinetics of helix cracking: network analysis by molecular dynamics and milestoning.

Authors:  Steven M Kreuzer; Tess J Moon; Ron Elber
Journal:  J Chem Phys       Date:  2013-09-28       Impact factor: 3.488

Review 7.  Models for the specific adhesion of cells to cells.

Authors:  G I Bell
Journal:  Science       Date:  1978-05-12       Impact factor: 47.728

8.  Shear-induced concanavalin A agglutination of human erythrocytes.

Authors:  R G Greig; D E Brooks
Journal:  Nature       Date:  1979-12-13       Impact factor: 49.962

9.  Exploring the propensities of helices in PrP(C) to form beta sheet using NMR structures and sequence alignments.

Authors:  R I Dima; D Thirumalai
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

10.  Mechanical switching and coupling between two dissociation pathways in a P-selectin adhesion bond.

Authors:  Evan Evans; Andrew Leung; Volkmar Heinrich; Cheng Zhu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-26       Impact factor: 11.205

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  14 in total

1.  Force-dependent switch in protein unfolding pathways and transition-state movements.

Authors:  Pavel I Zhuravlev; Michael Hinczewski; Shaon Chakrabarti; Susan Marqusee; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-27       Impact factor: 11.205

2.  Activated nanoscale actin-binding domain motion in the catenin-cadherin complex revealed by neutron spin echo spectroscopy.

Authors:  Bela Farago; Iain D Nicholl; Shen Wang; Xiaolin Cheng; David J E Callaway; Zimei Bu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-30       Impact factor: 11.205

3.  Regulatory element in fibrin triggers tension-activated transition from catch to slip bonds.

Authors:  Rustem I Litvinov; Olga Kononova; Artem Zhmurov; Kenneth A Marx; Valeri Barsegov; D Thirumalai; John W Weisel
Journal:  Proc Natl Acad Sci U S A       Date:  2018-08-07       Impact factor: 11.205

4.  Cell adhesion. The minimal cadherin-catenin complex binds to actin filaments under force.

Authors:  Craig D Buckley; Jiongyi Tan; Karen L Anderson; Dorit Hanein; Niels Volkmann; William I Weis; W James Nelson; Alexander R Dunn
Journal:  Science       Date:  2014-10-31       Impact factor: 47.728

5.  Notch-Jagged complex structure implicates a catch bond in tuning ligand sensitivity.

Authors:  Vincent C Luca; Byoung Choul Kim; Chenghao Ge; Shinako Kakuda; Di Wu; Mehdi Roein-Peikar; Robert S Haltiwanger; Cheng Zhu; Taekjip Ha; K Christopher Garcia
Journal:  Science       Date:  2017-03-02       Impact factor: 47.728

6.  Plasma fibronectin stabilizes Borrelia burgdorferi-endothelial interactions under vascular shear stress by a catch-bond mechanism.

Authors:  Alexandra F Niddam; Rhodaba Ebady; Anil Bansal; Anne Koehler; Boris Hinz; Tara J Moriarty
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-10       Impact factor: 11.205

7.  Forced-rupture of cell-adhesion complexes reveals abrupt switch between two brittle states.

Authors:  Ngo Minh Toan; D Thirumalai
Journal:  J Chem Phys       Date:  2018-03-28       Impact factor: 3.488

8.  Phenomenological and microscopic theories for catch bonds.

Authors:  Shaon Chakrabarti; Michael Hinczewski; D Thirumalai
Journal:  J Struct Biol       Date:  2016-04-01       Impact factor: 2.867

9.  Inside-out regulation of E-cadherin conformation and adhesion.

Authors:  Ramesh Koirala; Andrew Vae Priest; Chi-Fu Yen; Joleen S Cheah; Willem-Jan Pannekoek; Martijn Gloerich; Soichiro Yamada; Sanjeevi Sivasankar
Journal:  Proc Natl Acad Sci U S A       Date:  2021-07-27       Impact factor: 11.205

Review 10.  Force-induced remodelling of proteins and their complexes.

Authors:  Yun Chen; Sheena E Radford; David J Brockwell
Journal:  Curr Opin Struct Biol       Date:  2015-02-21       Impact factor: 6.809

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