Literature DB >> 16513778

Theoretical analysis of single-molecule force spectroscopy experiments: heterogeneity of chemical bonds.

M Raible1, M Evstigneev, F W Bartels, R Eckel, M Nguyen-Duong, R Merkel, R Ros, D Anselmetti, P Reimann.   

Abstract

We show that the standard theoretical framework in single-molecule force spectroscopy has to be extended to consistently describe the experimental findings. The basic amendment is to take into account heterogeneity of the chemical bonds via random variations of the force-dependent dissociation rates. This results in a very good agreement between theory and rupture data from several different experiments.

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Year:  2006        PMID： 16513778      PMCID： PMC1459525          DOI： 10.1529/biophysj.105.077099

Source DB:  PubMed          Journal:  Biophys J        ISSN： 0006-3495            Impact factor:   4.033


  23 in total

Review 1.  Probing the relation between force--lifetime--and chemistry in single molecular bonds.

Authors:  E Evans
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001

2.  Dynamic force spectroscopy of molecular adhesion bonds.

Authors:  B Heymann; H Grubmüller
Journal:  Phys Rev Lett       Date:  2000-06-26       Impact factor: 9.161

3.  LexA-DNA bond strength by single molecule force spectroscopy.

Authors:  F Kühner; L T Costa; P M Bisch; S Thalhammer; W M Heckl; H E Gaub
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

4.  Influence of tether dynamics on forced Kramers escape from a kinetic trap.

Authors:  Anirban Sain; Michael Wortis
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-09-03

5.  Supramolecular chemistry at the single-molecule level.

Authors:  Rainer Eckel; Robert Ros; Björn Decker; Jochen Mattay; Dario Anselmetti
Journal:  Angew Chem Int Ed Engl       Date:  2005-01-07       Impact factor: 15.336

6.  Specific binding of the regulatory protein ExpG to promoter regions of the galactoglucan biosynthesis gene cluster of Sinorhizobium meliloti--a combined molecular biology and force spectroscopy investigation.

Authors:  Frank Wilco Bartels; Birgit Baumgarth; Dario Anselmetti; Robert Ros; Anke Becker
Journal:  J Struct Biol       Date:  2003-08       Impact factor: 2.867

7.  Dynamic strength of molecular adhesion bonds.

Authors:  E Evans; K Ritchie
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

Review 8.  Models for the specific adhesion of cells to cells.

Authors:  G I Bell
Journal:  Science       Date:  1978-05-12       Impact factor: 47.728

9.  Direct measurement of the forces between complementary strands of DNA.

Authors:  G U Lee; L A Chrisey; R J Colton
Journal:  Science       Date:  1994-11-04       Impact factor: 47.728

10.  Molecular dynamics force probe simulations of antibody/antigen unbinding: entropic control and nonadditivity of unbinding forces.

Authors:  B Heymann; H Grubmüller
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033
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  18 in total

1.  Hidden multiple bond effects in dynamic force spectroscopy.

Authors:  Sebastian Getfert; Peter Reimann
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Long lifetime of hydrogen-bonded DNA basepairs by force spectroscopy.

Authors:  Alexander Fuhrmann; Sebastian Getfert; Qiang Fu; Peter Reimann; Stuart Lindsay; Robert Ros
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

3.  Force-induced lysozyme--HyHEL5 antibody dissociation and its analysis by means of a cooperative binding model.

Authors:  Stefan Katletz; Cordula Stroh; Christian Rankl; Urbaan M Titulaer; Peter Hinterdorfer
Journal:  Biophys J       Date:  2010-07-06       Impact factor: 4.033

4.  Antibody-unfolding and metastable-state binding in force spectroscopy and recognition imaging.

Authors:  Parminder Kaur; Alexander Fuhrmann; Robert Ros; Linda Obenauer Kutner; Lumelle A Schneeweis; Ryman Navoa; Kirby Steger; Lei Xie; Christopher Yonan; Ralph Abraham; Michael J Grace; Stuart Lindsay
Journal:  Biophys J       Date:  2011-01-05       Impact factor: 4.033

5.  A structural, kinetic model of soft tissue thermomechanics.

Authors:  Triantafyllos Stylianopoulos; Alptekin Aksan; Victor H Barocas
Journal:  Biophys J       Date:  2007-09-21       Impact factor: 4.033

6.  Impact of receptor-ligand distance on adhesion cluster stability.

Authors:  T Erdmann; U S Schwarz
Journal:  Eur Phys J E Soft Matter       Date:  2007-03-09       Impact factor: 1.890

7.  Methods and estimations of uncertainties in single-molecule dynamic force spectroscopy.

Authors:  Oscar Björnham; Staffan Schedin
Journal:  Eur Biophys J       Date:  2009-05-22       Impact factor: 1.733

8.  Mechanically interlocked calix[4]arene dimers display reversible bond breakage under force.

Authors:  Matthias Janke; Yuliya Rudzevich; Olena Molokanova; Thorsten Metzroth; Ingo Mey; Gregor Diezemann; Piotr E Marszalek; Jürgen Gauss; Volker Böhmer; Andreas Janshoff
Journal:  Nat Nanotechnol       Date:  2009-02-08       Impact factor: 39.213

9.  Effects of multiple-bond ruptures on kinetic parameters extracted from force spectroscopy measurements: revisiting biotin-streptavidin interactions.

Authors:  Senli Guo; Chad Ray; Andrea Kirkpatrick; Nimit Lad; Boris B Akhremitchev
Journal:  Biophys J       Date:  2008-07-11       Impact factor: 4.033

10.  Two barriers or not? Dynamic force spectroscopy on the integrin α7β1 invasin complex.

Authors:  Kristian Boye; Agnieszka Ligezowska; Johannes A Eble; Bernd Hoffmann; Beate Klösgen; Rudolf Merkel
Journal:  Biophys J       Date:  2013-12-17       Impact factor: 4.033
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