| Literature DB >> 15283866 |
Jonathan A Chappel1, William O Rogers, Stephen L Hoffman, Angray S Kang.
Abstract
BACKGROUND: The circumsporozoite surface protein is the primary target of human antibodies against Plasmodium falciparum sporozoites, these antibodies are predominantly directed to the major repetitive epitope (Asn-Pro-Asn-Ala)n, (NPNA)n. In individuals immunized by the bites of irradiated Anopheles mosquitoes carrying P. falciparum sporozoites in their salivary glands, the anti-repeat response dominates and is thought by many to play a role in protective immunity.Entities:
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Year: 2004 PMID: 15283866 PMCID: PMC509279 DOI: 10.1186/1475-2875-3-28
Source DB: PubMed Journal: Malar J ISSN: 1475-2875 Impact factor: 2.979
Figure 1VA schematic diagram of the steps involved in constructing a VH/κ library from mRNA isolated from PBL.
Figure 2Illustration of vectors pORFES, JC-M13-88 and pAbHIS.
Phage panning experiments ELISA plates (Dynatech Immulon I) were coated with BSA or (NPNA)3C-BSA and used in phage panning experiments. To the blocked antigen coated wells a total of 4 × 1010 pfu of the phage library in dilution buffer were added 1 × l010 pfu per well. After 4 h the wells were washed and phage eluted by applying either 0.1 M glycine-HCl pH 2.2 or a solution of the free peptide (~8 μM) (NPNA)3 dissolved in dilution buffer for 15 min at ambient temperature. An aliquot of the phage eluate was titered and the output determined.
| 1 | 2.9 (0.38) | 0.82 (0.032) | 3.0 (0.34) | 0.51 (0.024) |
| 2 | 1.4(0.03) | 0.24 (0.020) | 3.5 (0.24) | 1.5 (0.028) |
| 3 | 1.2(0.06) | 0.47 (0.020) | 4.3 (0.024) | 12 (0.68) |
| 4 | 13 (0.70) | 1.0(0.032) | 170 (30) | 370 (20) |
* Figures represent the mean of the total plaque forming units eluted by either acid or excess free peptide, after repeated panning against BSA or (NPNA)3C-BSA. Values for the standard deviation are shown in brackets ().
VH and VL assignments and alignment of CDR 3 sequences The selected (NP 04, 12, 13 designated Pf NPNA-1 bind to the repeat epitope), all other NP clones were randomly picked after the panning procedure and were subsequently shown not to be reactive with the repeat epitope. Non-selected (R01-10) were randomly picked from the library prior to initiating panning. The peptide sequence of the heavy and light chain complementarity-determining region 3 (CDR3) is shown below. VH/VL families, segments and the number of differences from germline segments were determined by using the V BASE sequence directory (Tomlinson, I. M., Williams, S. C., Corbett, S. J., Cox, J. P. L. & Winter, G., MRC Centre for Protein Engineering, Cambridge, UK) and the DNAPLOT alignment package (Müller, W. & Althaus, H.-H., Köln University)
| VHCDR3 | VLCDR3 | |||||||
| PfNPNAl | VH3 | DP46 | 10 | DRDSSSYFDS | VkI | L12a | 15 | QQYNSYSGLT |
| NP04, NP12, NP13 | VH3 | DP46 | 10 | DRDSSSYFDS | VkI | L12a | QQYNSYSGLT | |
| R01 | VH1 | 4M28†‡ | 28(+6)* §- | DSESVAQWRY | VkIV | DPK24 | 43 | QQSLSPVWT |
| R02 | VH3 | COS-3‡ | 27 (+3)_ | GVNWCSDY | VkI | DPK9 | 10 | QQSYSTSWT |
| R03 | VH5 | DP73 | 35 | LYTSIYYFDS | VkIV | DPK24 | 7 | QQYYSTPLT |
| R04 | VH3 | DP46 | 8 | DRVTNFWSGYFDY | VkIII | DPK22 | 13 | QQYGSSPGFT |
| R05 | VH3 | DP58 | 23 | DSTVKTVTKMRYGLD V | VkIII | DPK22 | 8 | QQYGSSPFT |
| R06 | VH1 | 4M28† | 12 | DNYGDPGGGFDI | VkIII | DPK22 | 11 | QQYGNSPRT |
| R07 | VH5 | DP73 | 9 | RFWFGELYDAFDI | VkIV | DPK24 | 16 | HQYYSTPQT |
| R08 | VH5 | DP73 | 34 | LYTSIYYFDS | VkIII | DPK22 | 14 | QQYGRSPWT |
| R09 | VH3 | V3-21† | 34 | DQGGGWSSEVDS | VkIII | Vg | 5 | QQRSNWPLT |
| R10 | VH1 | DP7‡ | 21 (+9)** | ALYGHDAFDI | VkI | DPK4 | 12 | PKYNSALHT |
| NP02 | VH3 | DP47 | 36 | ERPYDAFDS | VkIII | DPK22 | 23 | QQYSTSPPMYN |
| NP03 | VH5 | DP73 | 40 | LYTSIYYFDS | VkIII | Vg | 17 | KQRSKWPPIT |
| NP05 | VH3 | V3-48 | 14 | EPRGAGTTLYFDY | VkIII | DPK22 | 22 | QQYGGSPGYN |
| NP08 | VH4 | 4.30† | 18 | DRGVSSGWTFDC | VkII | DPK16 | 32 | MQLTAFPWT |
| NP09 | VH4 | DP71 | 17 | FRGGVAAGYDY | VkIII | DPK22 | 24 | QHYRESCS |
| NP10 | VH4 | DP78 | 29 | DRVRVPYYYIDV | VkIII | DPK22 | 15 | QQYGTSPYS |
| NP11 | VH3 | VH3-8† | 12 | DTTVTHYFDY | VkI | DPK9 | 21 | QQSFSSPRT |
| NP14 | VH1 | DP88 | 20 | GPGATIHYYYMDV | VkI | DPK8 | 18 | QQLDNYPLT |
| NP15 | VH5 | DP73 | 36 | LYTSIYYFDS | VkIII | DPK22 | 28 | QQYGNSPPT |
*Phage clones were either selected from the library at random (prefix R) or after four rounds of panning against (NPNA)3C-BSA, eluting with free (NPNA)3 peptide (prefix NP). † The segment given the best DNAPLOT match, although the segment sequence has not been verified by duplication. ‡ Aligned after removal of the unusual sequence additions (see§,-, ‡,-, **). § Figure in brackets indicates an unusual sequence addition. - Sequence has two additional codons in CDR1. - Sequence has one additional codon in CDR1. ** Sequence has three additional codons in CDR2.
Figure 3Indirect immunofluorescence assay (IFA) on Panel (A) PfNPNA-1 VH/κ, (B) 2A10 MAb.
Figure 4Competition ELISA.
Figure 5Determination of specificity of PfNPNA-1. The binding of immune serum (WR5), non-immune serum and PfNPNA-1 VH/κ to R32tet32, recombinant hepatitis core containing (NANP)4 peptide sequence and (NPNA)3C-BSA conjugate coated microtiter plate well was determined by ELISA essentially as described in Figure 4. The serum(s) and the recombinant PfNPNA-1 VH/κ were diluted 1/16 and 1/10 respectively.