Literature DB >> 1526977

Properties of aspartate racemase, a pyridoxal 5'-phosphate-independent amino acid racemase.

T Yamauchi1, S Y Choi, H Okada, M Yohda, H Kumagai, N Esaki, K Soda.   

Abstract

Aspartate racemase from Streptococcus thermophilus contains no pyridoxal 5'-phosphate or other cofactors such as FAD, NAD+, and metal ions. It was affected by neither carbonyl reagents such as hydroxylamine nor sodium borohydride but was strongly inhibited by iodoacetamide and other thiol reagents. Aspartate, cysteate, and cysteine sulfinate were the only substrates. The Km values for L- and D-aspartate were 35 and 8.7 mM, respectively. The enzyme catalyzed the exchange of alpha-hydrogen of the substrate with the solvent hydrogen. Racemization of L-aspartate in 2H2O showed an overshooting in the optical rotation of aspartate before the substrate was fully racemized. This shows that the removal of alpha-hydrogen of the substrate is at least partially rate-determining. When L- or D-aspartate was incubated with aspartate racemase in tritiated water, tritium was incorporated preferentially into the product enantiomer. The results strongly suggest that aspartate racemase contains two hydrogen acceptors.

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Year:  1992        PMID: 1526977

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  15 in total

1.  Molecular cloning and enzymological characterization of pyridoxal 5'-phosphate independent aspartate racemase from hyperthermophilic archaeon Thermococcus litoralis DSM 5473.

Authors:  Tsubasa Washio; Shiro Kato; Tadao Oikawa
Journal:  Extremophiles       Date:  2016-07-20       Impact factor: 2.395

2.  Role of chirality in olfactory-directed behavior: Aggregation of pine engraver beetles in the genusIps (Coleoptera: Scolytidae).

Authors:  S J Seybold
Journal:  J Chem Ecol       Date:  1993-08       Impact factor: 2.626

3.  Expression of Pyridoxal 5'-Phosphate-Independent Racemases Can Reduce 2-Aminoacrylate Stress in Salmonella enterica.

Authors:  Kelsey M Hodge-Hanson; Allison Zoino; Diana M Downs
Journal:  J Bacteriol       Date:  2018-04-09       Impact factor: 3.490

4.  Biodegradation of all stereoisomers of the EDTA substitute iminodisuccinate by Agrobacterium tumefaciens BY6 requires an epimerase and a stereoselective C-N lyase.

Authors:  Zeljko Cokesa; Hans-Joachim Knackmuss; Paul-Gerhard Rieger
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

5.  Structural and functional characterization of aspartate racemase from the acidothermophilic archaeon Picrophilus torridus.

Authors:  Takayuki Aihara; Toshiya Ito; Yasuaki Yamanaka; Keiichi Noguchi; Masafumi Odaka; Masae Sekine; Hiroshi Homma; Masafumi Yohda
Journal:  Extremophiles       Date:  2016-04-19       Impact factor: 2.395

6.  Bacterial glutamate racemase has high sequence similarity with myoglobins and forms an equimolar inactive complex with hemin.

Authors:  S Y Choi; N Esaki; M Ashiuchi; T Yoshimura; K Soda
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-11       Impact factor: 11.205

7.  Purification and properties of thermostable N-acylamino acid racemase from Amycolatopsis sp. TS-1-60.

Authors:  S Tokuyama; K Hatano
Journal:  Appl Microbiol Biotechnol       Date:  1995-03       Impact factor: 4.813

8.  Crystallization and preliminary X-ray crystallographic studies of glutamate racemase from Lactobacillus fermenti.

Authors:  Ki-Seog Lee; Seon-Mi Park; Kwang Yeon Hwang; Young-Min Chi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2005-01-20

9.  Crystallographic studies of aspartate racemase from Lactobacillus sakei NBRC 15893.

Authors:  Tomomi Fujii; Takae Yamauchi; Makoto Ishiyama; Yoshitaka Gogami; Tadao Oikawa; Yasuo Hata
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-07-28       Impact factor: 1.056

10.  Posttranslational amino acid epimerization: enzyme-catalyzed isomerization of amino acid residues in peptide chains.

Authors:  S D Heck; W S Faraci; P R Kelbaugh; N A Saccomano; P F Thadeio; R A Volkmann
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-30       Impact factor: 11.205

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