Literature DB >> 15254252

A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p.

Fan Zhang1, Laarni Sumibcay, Alan G Hinnebusch, Mark J Swanson.   

Abstract

The Srb mediator is an important transcriptional coactivator for Gcn4p in the yeast Saccharomyces cerevisiae. We show that three subunits of the Gal11/tail domain of mediator, Gal11p, Pgd1p, and Med2p, and the head domain subunit Srb2p make overlapping contributions to the interaction of mediator with recombinant Gcn4p in vitro. Each of these proteins, along with the tail subunit Sin4p, also contributes to the recruitment of mediator by Gcn4p to target promoters in vivo. We found that Gal11p, Med2p, and Pgd1p reside in a stable subcomplex in sin4Delta cells that interacts with Gcn4p in vitro and that is recruited independently of the rest of mediator by Gcn4p in vivo. Thus, the Gal11p/Med2p/Pgd1p triad is both necessary for recruitment of intact mediator and appears to be sufficient for recruitment by Gcn4p as a free subcomplex. The med2Delta mutation impairs the recruitment of TATA binding protein (TBP) and RNA polymerase II to the promoter and the induction of transcription at ARG1, demonstrating the importance of the tail domain for activation by Gcn4p in vivo. Even though the Gal11p/Med2p/Pgd1p triad is the only portion of Srb mediator recruited efficiently to the promoter in the sin4Delta strain, this mutant shows high-level TBP recruitment and wild-type transcriptional induction at ARG1. Hence, the Gal11p/Med2p/Pgd1p triad may contribute to TBP recruitment independently of the rest of mediator.

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Year:  2004        PMID: 15254252      PMCID: PMC444856          DOI: 10.1128/MCB.24.15.6871-6886.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  42 in total

1.  Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme.

Authors:  L Kuras; K Struhl
Journal:  Nature       Date:  1999-06-10       Impact factor: 49.962

2.  Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator.

Authors:  K Natarajan; B M Jackson; H Zhou; F Winston; A G Hinnebusch
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

Review 3.  Transcription of eukaryotic protein-coding genes.

Authors:  T I Lee; R A Young
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

4.  In vivo requirement of activator-specific binding targets of mediator.

Authors:  J M Park; H S Kim; S J Han; M S Hwang; Y C Lee; Y J Kim
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

5.  The structural and functional organization of the yeast mediator complex.

Authors:  J S Kang; S H Kim; M S Hwang; S J Han; Y C Lee; Y J Kim
Journal:  J Biol Chem       Date:  2001-09-12       Impact factor: 5.157

6.  Structural organization of yeast and mammalian mediator complexes.

Authors:  M R Dotson; C X Yuan; R G Roeder; L C Myers; C M Gustafsson; Y W Jiang; Y Li; R D Kornberg; F J Asturias
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

7.  Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit.

Authors:  C E Brown; L Howe; K Sousa; S C Alley; M J Carrozza; S Tan; J L Workman
Journal:  Science       Date:  2001-06-22       Impact factor: 47.728

Review 8.  Mediator of transcriptional regulation.

Authors:  L C Myers; R D Kornberg
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

9.  Yeast nuclear extract contains two major forms of RNA polymerase II mediator complexes.

Authors:  Y Liu; J A Ranish; R Aebersold; S Hahn
Journal:  J Biol Chem       Date:  2001-03-09       Impact factor: 5.157

10.  Functional profiling of the Saccharomyces cerevisiae genome.

Authors:  Guri Giaever; Angela M Chu; Li Ni; Carla Connelly; Linda Riles; Steeve Véronneau; Sally Dow; Ankuta Lucau-Danila; Keith Anderson; Bruno André; Adam P Arkin; Anna Astromoff; Mohamed El-Bakkoury; Rhonda Bangham; Rocio Benito; Sophie Brachat; Stefano Campanaro; Matt Curtiss; Karen Davis; Adam Deutschbauer; Karl-Dieter Entian; Patrick Flaherty; Francoise Foury; David J Garfinkel; Mark Gerstein; Deanna Gotte; Ulrich Güldener; Johannes H Hegemann; Svenja Hempel; Zelek Herman; Daniel F Jaramillo; Diane E Kelly; Steven L Kelly; Peter Kötter; Darlene LaBonte; David C Lamb; Ning Lan; Hong Liang; Hong Liao; Lucy Liu; Chuanyun Luo; Marc Lussier; Rong Mao; Patrice Menard; Siew Loon Ooi; Jose L Revuelta; Christopher J Roberts; Matthias Rose; Petra Ross-Macdonald; Bart Scherens; Greg Schimmack; Brenda Shafer; Daniel D Shoemaker; Sharon Sookhai-Mahadeo; Reginald K Storms; Jeffrey N Strathern; Giorgio Valle; Marleen Voet; Guido Volckaert; Ching-yun Wang; Teresa R Ward; Julie Wilhelmy; Elizabeth A Winzeler; Yonghong Yang; Grace Yen; Elaine Youngman; Kexin Yu; Howard Bussey; Jef D Boeke; Michael Snyder; Peter Philippsen; Ronald W Davis; Mark Johnston
Journal:  Nature       Date:  2002-07-25       Impact factor: 49.962

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  77 in total

1.  Distinct role of Mediator tail module in regulation of SAGA-dependent, TATA-containing genes in yeast.

Authors:  Suraiya A Ansari; Mythily Ganapathi; Joris J Benschop; Frank C P Holstege; Joseph T Wade; Randall H Morse
Journal:  EMBO J       Date:  2011-10-04       Impact factor: 11.598

2.  Selective role of Mediator tail module in the transcription of highly regulated genes in yeast.

Authors:  Suraiya A Ansari; Randall H Morse
Journal:  Transcription       Date:  2012 May-Jun

3.  Mechanism of Mediator recruitment by tandem Gcn4 activation domains and three Gal11 activator-binding domains.

Authors:  Eric Herbig; Linda Warfield; Lisa Fish; James Fishburn; Bruce A Knutson; Beth Moorefield; Derek Pacheco; Steven Hahn
Journal:  Mol Cell Biol       Date:  2010-03-22       Impact factor: 4.272

4.  A chromatin-remodeling protein is a component of fission yeast mediator.

Authors:  Olga Khorosjutina; Paulina H Wanrooij; Julian Walfridsson; Zsolt Szilagyi; Xuefeng Zhu; Vera Baraznenok; Karl Ekwall; Claes M Gustafsson
Journal:  J Biol Chem       Date:  2010-07-09       Impact factor: 5.157

5.  Rli1/ABCE1 Recycles Terminating Ribosomes and Controls Translation Reinitiation in 3'UTRs In Vivo.

Authors:  David J Young; Nicholas R Guydosh; Fan Zhang; Alan G Hinnebusch; Rachel Green
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

6.  A Role for Mediator Core in Limiting Coactivator Recruitment in Saccharomyces cerevisiae.

Authors:  Robert M Yarrington; Yaxin Yu; Chao Yan; Lu Bai; David J Stillman
Journal:  Genetics       Date:  2020-04-23       Impact factor: 4.562

7.  Independent recruitment of mediator and SAGA by the activator Met4.

Authors:  Christophe Leroy; Laëtitia Cormier; Laurent Kuras
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

8.  The Spt4p subunit of yeast DSIF stimulates association of the Paf1 complex with elongating RNA polymerase II.

Authors:  Hongfang Qiu; Cuihua Hu; Chi-Ming Wong; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

9.  The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

Authors:  Malika Saint; Sonal Sawhney; Ishani Sinha; Rana Pratap Singh; Rashmi Dahiya; Anushikha Thakur; Rahul Siddharthan; Krishnamurthy Natarajan
Journal:  Mol Cell Biol       Date:  2014-02-18       Impact factor: 4.272

10.  Suppression of Mediator is regulated by Cdk8-dependent Grr1 turnover of the Med3 coactivator.

Authors:  Deyarina Gonzalez; Nurul Hamidi; Ricardo Del Sol; Joris J Benschop; Thomas Nancy; Chao Li; Lewis Francis; Manuel Tzouros; Jeroen Krijgsveld; Frank C P Holstege; R Steven Conlan
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-03       Impact factor: 11.205

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