Literature DB >> 32327563

A Role for Mediator Core in Limiting Coactivator Recruitment in Saccharomyces cerevisiae.

Robert M Yarrington1, Yaxin Yu1, Chao Yan2,3,4, Lu Bai2,3,4, David J Stillman5.   

Abstract

Mediator is an essential, multisubunit complex that functions as a transcriptional coactivator in yeast and other eukaryotic organisms. Mediator has four conserved modules, Head, Middle, Tail, and Kinase, and has been implicated in nearly all aspects of gene regulation. The Tail module has been shown to recruit the Mediator complex to the enhancer or upstream activating sequence (UAS) regions of genes via interactions with transcription factors, and the Kinase module facilitates the transition of Mediator from the UAS/enhancer to the preinitiation complex via protein phosphorylation. Here, we analyze expression of the Saccharomyces cerevisiae HO gene using a sin4 Mediator Tail mutation that separates the Tail module from the rest of the complex; the sin4 mutation permits independent recruitment of the Tail module to promoters without the rest of Mediator. Significant increases in recruitment of the SWI/SNF and SAGA coactivators to the HO promoter UAS were observed in a sin4 mutant, along with increased gene activation. These results are consistent with recent studies that have suggested that the Kinase module functions negatively to inhibit activation by the Tail. However, we found that Kinase module mutations did not mimic the effect of a sin4 mutation on HO expression. This suggests that at HO the core Mediator complex (Middle and Head modules) must play a role in limiting Tail binding to the promoter UAS and gene activation. We propose that the core Mediator complex helps modulate Mediator binding to the UAS regions of genes to limit coactivator recruitment and ensure proper regulation of gene transcription.
Copyright © 2020 by the Genetics Society of America.

Entities:  

Keywords:  chromatin; coactivator; gene regulation; mediator

Mesh:

Substances:

Year:  2020        PMID: 32327563      PMCID: PMC7268993          DOI: 10.1534/genetics.120.303254

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  67 in total

1.  Targeting, disruption, replacement, and allele rescue: integrative DNA transformation in yeast.

Authors:  R Rothstein
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

2.  Stochastic expression and epigenetic memory at the yeast HO promoter.

Authors:  Qian Zhang; Youngdae Yoon; Yaxin Yu; Emily J Parnell; Juan Antonio Raygoza Garay; Michael M Mwangi; Frederick R Cross; David J Stillman; Lu Bai
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-08       Impact factor: 11.205

3.  Evidence that Mediator is essential for Pol II transcription, but is not a required component of the preinitiation complex in vivo.

Authors:  Natalia Petrenko; Yi Jin; Koon Ho Wong; Kevin Struhl
Journal:  Elife       Date:  2017-07-12       Impact factor: 8.140

4.  Repressive chromatin affects factor binding at yeast HO (homothallic switching) promoter.

Authors:  Shinya Takahata; Yaxin Yu; David J Stillman
Journal:  J Biol Chem       Date:  2011-08-12       Impact factor: 5.157

5.  Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes.

Authors:  S M Roberts; F Winston
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

6.  A genomic study of the inter-ORF distances in Saccharomyces cerevisiae.

Authors:  Vicent Pelechano; José García-Martínez; José E Pérez-Ortín
Journal:  Yeast       Date:  2006-07-15       Impact factor: 3.239

7.  A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p.

Authors:  Fan Zhang; Laarni Sumibcay; Alan G Hinnebusch; Mark J Swanson
Journal:  Mol Cell Biol       Date:  2004-08       Impact factor: 4.272

8.  New 'marker swap' plasmids for converting selectable markers on budding yeast gene disruptions and plasmids.

Authors:  Warren P Voth; Yi Wei Jiang; David J Stillman
Journal:  Yeast       Date:  2003-08       Impact factor: 3.239

9.  FACT and Asf1 regulate nucleosome dynamics and coactivator binding at the HO promoter.

Authors:  Shinya Takahata; Yaxin Yu; David J Stillman
Journal:  Mol Cell       Date:  2009-05-14       Impact factor: 17.970

Review 10.  The Mediator complex and transcription regulation.

Authors:  Zachary C Poss; Christopher C Ebmeier; Dylan J Taatjes
Journal:  Crit Rev Biochem Mol Biol       Date:  2013-10-03       Impact factor: 8.250

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  2 in total

1.  Cyclin C-Cdk8 Kinase Phosphorylation of Rim15 Prevents the Aberrant Activation of Stress Response Genes.

Authors:  Stephen D Willis; Sara E Hanley; Steven J Doyle; Katherine Beluch; Randy Strich; Katrina F Cooper
Journal:  Front Cell Dev Biol       Date:  2022-03-31

Review 2.  Function and dynamics of the Mediator complex: novel insights and new frontiers.

Authors:  Randall H Morse
Journal:  Transcription       Date:  2022-06-16
  2 in total

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