Literature DB >> 15228385

Characterization of the polyene macrolide P450 epoxidase from Streptomyces natalensis that converts de-epoxypimaricin into pimaricin.

Marta V Mendes1, Nuria Antón, Juan F Martín, Jesús F Aparicio.   

Abstract

The biosynthesis of the antifungal agent pimaricin by Streptomyces natalensis has been proposed to involve a cytochrome P450 encoded by the gene pimD. Pimaricin is derived from its immediate precursor de-epoxypimaricin by epoxidation of the C-4-C-5 double bond on the macrolactone ring. We have overproduced PimD with a N-terminal His6 affinity tag in Escherichia coli and purified the enzyme for kinetic analysis. The protein showed a reduced CO-difference spectrum with a Soret maximum at 450 nm, indicating that it is a cytochrome P450. Purified PimD was shown to catalyse the in vitro C-4-C-5 epoxidation of 4,5-de-epoxypimaricin to pimaricin. The enzyme was dependent on NADPH for activity with optimal pH at 7.5, and the temperature optimum was 30 degrees C. The kcat value for the epoxidation of de-epoxypimaricin was similar to the values reported for other macrolide oxidases. Enzyme activity was inhibited at high substrate concentration. This is the first time that a polyene macrolide P450 mono-oxygenase has been expressed heterologously and studied. The unique specificity of this epoxidase should be useful for the oxidative modification of novel polyene macrolide antibiotics.

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Year:  2005        PMID: 15228385      PMCID: PMC1134766          DOI: 10.1042/BJ20040490

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  22 in total

1.  The biosynthetic gene cluster for the 26-membered ring polyene macrolide pimaricin. A new polyketide synthase organization encoded by two subclusters separated by functionalization genes.

Authors:  J F Aparicio; A J Colina; E Ceballos; J F Martín
Journal:  J Biol Chem       Date:  1999-04-09       Impact factor: 5.157

2.  A complex multienzyme system encoded by five polyketide synthase genes is involved in the biosynthesis of the 26-membered polyene macrolide pimaricin in Streptomyces natalensis.

Authors:  J F Aparicio; R Fouces; M V Mendes; N Olivera; J F Martín
Journal:  Chem Biol       Date:  2000-11

3.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

4.  Cloning and heterologous expression of the epothilone gene cluster.

Authors:  L Tang; S Shah; L Chung; J Carney; L Katz; C Khosla; B Julien
Journal:  Science       Date:  2000-01-28       Impact factor: 47.728

5.  Biosynthesis of the polyene antifungal antibiotic nystatin in Streptomyces noursei ATCC 11455: analysis of the gene cluster and deduction of the biosynthetic pathway.

Authors:  T Brautaset; O N Sekurova; H Sletta; T E Ellingsen; A R StrŁm; S Valla; S B Zotchev
Journal:  Chem Biol       Date:  2000-06

6.  Engineered biosynthesis of novel polyenes: a pimaricin derivative produced by targeted gene disruption in Streptomyces natalensis.

Authors:  M V Mendes; E Recio; R Fouces; R Luiten; J F Martín; J F Aparicio
Journal:  Chem Biol       Date:  2001-07

7.  Amphotericin biosynthesis in Streptomyces nodosus: deductions from analysis of polyketide synthase and late genes.

Authors:  P Caffrey; S Lynch; E Flood; S Finnan; M Oliynyk
Journal:  Chem Biol       Date:  2001-07

Review 8.  Polyene antibiotic biosynthesis gene clusters.

Authors:  J F Aparicio; P Caffrey; J A Gil; S B Zotchev
Journal:  Appl Microbiol Biotechnol       Date:  2002-12-18       Impact factor: 4.813

9.  Identification of PimR as a positive regulator of pimaricin biosynthesis in Streptomyces natalensis.

Authors:  Nuria Antón; Marta V Mendes; Juan F Martín; Jesús F Aparicio
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

10.  Biosynthesis of deoxyamphotericins and deoxyamphoteronolides by engineered strains of Streptomyces nodosus.

Authors:  Barry Byrne; Maria Carmody; Emma Gibson; Bernard Rawlings; Patrick Caffrey
Journal:  Chem Biol       Date:  2003-12
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  20 in total

1.  Molecular control of polyene macrolide biosynthesis: direct binding of the regulator PimM to eight promoters of pimaricin genes and identification of binding boxes.

Authors:  Javier Santos-Aberturas; Cláudia M Vicente; Susana M Guerra; Tamara D Payero; Juan F Martín; Jesús F Aparicio
Journal:  J Biol Chem       Date:  2010-12-27       Impact factor: 5.157

Review 2.  Enzymatic chemistry of cyclopropane, epoxide, and aziridine biosynthesis.

Authors:  Christopher J Thibodeaux; Wei-chen Chang; Hung-wen Liu
Journal:  Chem Rev       Date:  2011-10-21       Impact factor: 60.622

3.  The in vitro characterization of polyene glycosyltransferases AmphDI and NysDI.

Authors:  Changsheng Zhang; Rocco Moretti; Jiqing Jiang; Jon S Thorson
Journal:  Chembiochem       Date:  2008-10-13       Impact factor: 3.164

4.  Functional analysis of MycCI and MycG, cytochrome P450 enzymes involved in biosynthesis of mycinamicin macrolide antibiotics.

Authors:  Yojiro Anzai; Shengying Li; Mani Raj Chaulagain; Kenji Kinoshita; Fumio Kato; John Montgomery; David H Sherman
Journal:  Chem Biol       Date:  2008-09-22

5.  The plmS2-encoded cytochrome P450 monooxygenase mediates hydroxylation of phoslactomycin B in Streptomyces sp. strain HK803.

Authors:  Mohini S Ghatge; Kevin A Reynolds
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

6.  Proximal ligand electron donation and reactivity of the cytochrome P450 ferric-peroxo anion.

Authors:  Santhosh Sivaramakrishnan; Hugues Ouellet; Hirotoshi Matsumura; Shenheng Guan; Pierre Moënne-Loccoz; Alma L Burlingame; Paul R Ortiz de Montellano
Journal:  J Am Chem Soc       Date:  2012-04-04       Impact factor: 15.419

Review 7.  Cytochromes P450 for natural product biosynthesis in Streptomyces: sequence, structure, and function.

Authors:  Jeffrey D Rudolf; Chin-Yuan Chang; Ming Ma; Ben Shen
Journal:  Nat Prod Rep       Date:  2017-08-30       Impact factor: 13.423

8.  Solution Conformations and Dynamics of Substrate-Bound Cytochrome P450 MycG.

Authors:  Drew R Tietz; Larissa M Podust; David H Sherman; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2017-05-16       Impact factor: 3.162

9.  Characterization of CalE10, the N-oxidase involved in calicheamicin hydroxyaminosugar formation.

Authors:  Heather D Johnson; Jon S Thorson
Journal:  J Am Chem Soc       Date:  2008-12-31       Impact factor: 15.419

10.  Analysis of the cryptophycin P450 epoxidase reveals substrate tolerance and cooperativity.

Authors:  Yousong Ding; Wolfgang H Seufert; Zachary Q Beck; David H Sherman
Journal:  J Am Chem Soc       Date:  2008-03-26       Impact factor: 15.419

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