Literature DB >> 15189858

Membrane perturbation induced by interfacially adsorbed peptides.

Assaf Zemel1, Avinoam Ben-Shaul, Sylvio May.   

Abstract

The structural and energetic characteristics of the interaction between interfacially adsorbed (partially inserted) alpha-helical, amphipathic peptides and the lipid bilayer substrate are studied using a molecular level theory of lipid chain packing in membranes. The peptides are modeled as "amphipathic cylinders" characterized by a well-defined polar angle. Assuming two-dimensional nematic order of the adsorbed peptides, the membrane perturbation free energy is evaluated using a cell-like model; the peptide axes are parallel to the membrane plane. The elastic and interfacial contributions to the perturbation free energy of the "peptide-dressed" membrane are evaluated as a function of: the peptide penetration depth into the bilayer's hydrophobic core, the membrane thickness, the polar angle, and the lipid/peptide ratio. The structural properties calculated include the shape and extent of the distorted (stretched and bent) lipid chains surrounding the adsorbed peptide, and their orientational (C-H) bond order parameter profiles. The changes in bond order parameters attendant upon peptide adsorption are in good agreement with magnetic resonance measurements. Also consistent with experiment, our model predicts that peptide adsorption results in membrane thinning. Our calculations reveal pronounced, membrane-mediated, attractive interactions between the adsorbed peptides, suggesting a possible mechanism for lateral aggregation of membrane-bound peptides. As a special case of interest, we have also investigated completely hydrophobic peptides, for which we find a strong energetic preference for the transmembrane (inserted) orientation over the horizontal (adsorbed) orientation.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15189858      PMCID: PMC1304263          DOI: 10.1529/biophysj.103.033605

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  34 in total

Review 1.  The structure, dynamics and orientation of antimicrobial peptides in membranes by multidimensional solid-state NMR spectroscopy.

Authors:  B Bechinger
Journal:  Biochim Biophys Acta       Date:  1999-12-15

2.  Structure, location, and lipid perturbations of melittin at the membrane interface.

Authors:  K Hristova; C E Dempsey; S H White
Journal:  Biophys J       Date:  2001-02       Impact factor: 4.033

3.  Magainin 2 in phospholipid bilayers: peptide orientation and lipid chain ordering studied by X-ray diffraction.

Authors:  Christian Münster; Alexander Spaar; Burkhard Bechinger; Tim Salditt
Journal:  Biochim Biophys Acta       Date:  2002-05-03

4.  Insertion and pore formation driven by adsorption of proteins onto lipid bilayer membrane-water interfaces.

Authors:  M J Zuckermann; T Heimburg
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

5.  Stability of a melittin pore in a lipid bilayer: a molecular dynamics study.

Authors:  J H Lin; A Baumgaertner
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

6.  Theoretical analysis of hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin.

Authors:  T A Harroun; W T Heller; T M Weiss; L Yang; H W Huang
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

7.  Orientation and dynamics of an antimicrobial peptide in the lipid bilayer by solid-state NMR spectroscopy.

Authors:  S Yamaguchi; D Huster; A Waring; R I Lehrer; W Kearney; B F Tack; M Hong
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

Review 8.  Towards an understanding of complex biological membranes from atomistic molecular dynamics simulations.

Authors:  Leonor Saiz; Sanjoy Bandyopadhyay; Michael L Klein
Journal:  Biosci Rep       Date:  2002-04       Impact factor: 3.840

9.  Topological stability and self-association of a completely hydrophobic model transmembrane helix in lipid bilayers.

Authors:  Yoshiaki Yano; Tomokazu Takemoto; Satoe Kobayashi; Hiroyuki Yasui; Hiromu Sakurai; Wakana Ohashi; Miki Niwa; Shiroh Futaki; Yukio Sugiura; Katsumi Matsuzaki
Journal:  Biochemistry       Date:  2002-03-05       Impact factor: 3.162

Review 10.  Solid-state NMR investigations of interaction contributions that determine the alignment of helical polypeptides in biological membranes.

Authors:  B Bechinger
Journal:  FEBS Lett       Date:  2001-08-31       Impact factor: 4.124

View more
  21 in total

1.  Diffusion as a probe of the heterogeneity of antimicrobial peptide-membrane interactions.

Authors:  Kathryn B Smith-Dupont; Lin Guo; Feng Gai
Journal:  Biochemistry       Date:  2010-06-08       Impact factor: 3.162

2.  Perturbation of a lipid membrane by amphipathic peptides and its role in pore formation.

Authors:  Assaf Zemel; Avinoam Ben-Shaul; Sylvio May
Journal:  Eur Biophys J       Date:  2004-12-24       Impact factor: 1.733

3.  Antimicrobial peptides temporins B and L induce formation of tubular lipid protrusions from supported phospholipid bilayers.

Authors:  Yegor A Domanov; Paavo K J Kinnunen
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

4.  Monte Carlo simulations of tBid association with the mitochondrial outer membrane.

Authors:  Valery G Veresov; Alexander I Davidovskii
Journal:  Eur Biophys J       Date:  2007-03-21       Impact factor: 1.733

5.  Coarse-grained simulation studies of peptide-induced pore formation.

Authors:  Gregoria Illya; Markus Deserno
Journal:  Biophys J       Date:  2008-07-18       Impact factor: 4.033

6.  Factors influencing local membrane curvature induction by N-BAR domains as revealed by molecular dynamics simulations.

Authors:  Philip D Blood; Richard D Swenson; Gregory A Voth
Journal:  Biophys J       Date:  2008-05-09       Impact factor: 4.033

7.  The lantibiotic nisin induces lipid II aggregation, causing membrane instability and vesicle budding.

Authors:  Katharina M Scherer; Jan-Hendrik Spille; Hans-Georg Sahl; Fabian Grein; Ulrich Kubitscheck
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

8.  Probing the Huntingtin 1-17 membrane anchor on a phospholipid bilayer by using all-atom simulations.

Authors:  Sébastien Côté; Vincent Binette; Evgeniy S Salnikov; Burkhard Bechinger; Normand Mousseau
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

9.  Active fragments from pro- and antiapoptotic BCL-2 proteins have distinct membrane behavior reflecting their functional divergence.

Authors:  Yannis Guillemin; Jonathan Lopez; Diana Gimenez; Gustavo Fuertes; Juan Garcia Valero; Loïc Blum; Philippe Gonzalo; Jesùs Salgado; Agnès Girard-Egrot; Abdel Aouacheria
Journal:  PLoS One       Date:  2010-02-05       Impact factor: 3.240

10.  Inclusion of lateral pressure/curvature stress effects in implicit membrane models.

Authors:  Huan Zhan; Themis Lazaridis
Journal:  Biophys J       Date:  2013-02-05       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.