Literature DB >> 11863446

Topological stability and self-association of a completely hydrophobic model transmembrane helix in lipid bilayers.

Yoshiaki Yano1, Tomokazu Takemoto, Satoe Kobayashi, Hiroyuki Yasui, Hiromu Sakurai, Wakana Ohashi, Miki Niwa, Shiroh Futaki, Yukio Sugiura, Katsumi Matsuzaki.   

Abstract

Investigation of interactions between hydrophobic model peptides and lipid bilayers is perhaps the only way to elucidate the principles of the folding and stability of membrane proteins (White, S. H., and Wimley, W. C. (1998) Biochim. Biophys. Acta 1367, 339-352). We designed the completely hydrophobic "inert" peptide modeling a transmembrane (TM) helix without any of the specific side-chain interactions expected, X-(LALAAAA)(3)-NH(2) [X = Ac (I), 7-nitro-2-1,3-benzoxadiazol-4-yl (II), or 5(6)-carboxytetramethylrhodamine (III)]. Fourier transform infrared-polarized attenuated total reflection measurements revealed that I as well as II assume a TM helix in hydrated 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine bilayers. Dithionite quenching experiments detected no topological change (flip-flop) in the helix II for at least 24 h. Thus, the TM helix itself is a highly stable structure, even in the absence of flanking hydrophilic or aromatic amino acids which are suggested to play important roles in stable TM positioning. Helix self-association in lipid bilayers was detected by fluorescence resonance energy transfer between II and III. The peptide was in a monomer-antiparallel dimer equilibrium with an association free energy of approximately -13 kJ/mol. Electron spin resonance spectra of 1-palmitoyl-2-stearoyl-(14-doxyl)-sn-glycero-3-phosphocholine demonstrated the presence of a motionally restricted component at lower temperatures.

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Year:  2002        PMID: 11863446     DOI: 10.1021/bi011161y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Organization of model helical peptides in lipid bilayers: insight into the behavior of single-span protein transmembrane domains.

Authors:  Simon Sharpe; Kathryn R Barber; Chris W M Grant; David Goodyear; Michael R Morrow
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

Review 2.  How do helix-helix interactions help determine the folds of membrane proteins? Perspectives from the study of homo-oligomeric helical bundles.

Authors:  William F DeGrado; Holly Gratkowski; James D Lear
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

3.  Membrane perturbation induced by interfacially adsorbed peptides.

Authors:  Assaf Zemel; Avinoam Ben-Shaul; Sylvio May
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

4.  Quantification of helix-helix binding affinities in micelles and lipid bilayers.

Authors:  Andrei L Lomize; I D Pogozheva; H I Mosberg
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

5.  Interpretation of 2H-NMR experiments on the orientation of the transmembrane helix WALP23 by computer simulations.

Authors:  Luca Monticelli; D Peter Tieleman; Patrick F J Fuchs
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

6.  Translocation of molecules into cells by pH-dependent insertion of a transmembrane helix.

Authors:  Yana K Reshetnyak; Oleg A Andreev; Ursula Lehnert; Donald M Engelman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-11       Impact factor: 11.205

7.  A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers.

Authors:  Yana K Reshetnyak; Michael Segala; Oleg A Andreev; Donald M Engelman
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

Review 8.  Orientation and dynamics of transmembrane peptides: the power of simple models.

Authors:  Andrea Holt; J Antoinette Killian
Journal:  Eur Biophys J       Date:  2009-12-18       Impact factor: 1.733

9.  Packing of apolar side chains enables accurate design of highly stable membrane proteins.

Authors:  Marco Mravic; Jessica L Thomaston; Maxwell Tucker; Paige E Solomon; Lijun Liu; William F DeGrado
Journal:  Science       Date:  2019-03-29       Impact factor: 47.728

10.  GXXXG-Mediated Parallel and Antiparallel Dimerization of Transmembrane Helices and Its Inhibition by Cholesterol: Single-Pair FRET and 2D IR Studies.

Authors:  Yoshiaki Yano; Kotaro Kondo; Yuta Watanabe; Tianqi O Zhang; Jia-Jung Ho; Shinya Oishi; Nobutaka Fujii; Martin T Zanni; Katsumi Matsuzaki
Journal:  Angew Chem Int Ed Engl       Date:  2017-01-10       Impact factor: 15.336

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