Literature DB >> 15165892

Circadian clocks and natural antisense RNA.

Susan K Crosthwaite1.   

Abstract

Eukaryotes regulate gene expression in a number of different ways. On a daily and seasonal timescale, the orchestration of gene expression is to a large extent governed by circadian clocks. These endogenous timekeepers enable organisms to prepare for predictable environmental conditions from one day to the next and thus allow adaptation to a given temporal niche. In general, circadian clocks have been shown to employ the classical transcriptional and posttranscriptional control mechanisms to generate rhythmicity. However, the discovery of antisense clock gene transcripts suggests that mechanisms of gene regulation operating through antisense RNA may also be integral to the circadian clockwork. Following a brief history of the impact of genetic and molecular techniques in aiding our understanding of circadian clocks, this review concentrates on the few examples of antisense clock gene transcripts so far investigated and their effect on circadian timing.

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Year:  2004        PMID: 15165892     DOI: 10.1016/j.febslet.2004.04.073

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  15 in total

Review 1.  How plants tell the time.

Authors:  Michael J Gardner; Katharine E Hubbard; Carlos T Hotta; Antony N Dodd; Alex A R Webb
Journal:  Biochem J       Date:  2006-07-01       Impact factor: 3.857

2.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

3.  A tunable synthetic mammalian oscillator.

Authors:  Marcel Tigges; Tatiana T Marquez-Lago; Jörg Stelling; Martin Fussenegger
Journal:  Nature       Date:  2009-01-15       Impact factor: 49.962

Review 4.  The role of microRNAs (miRNA) in circadian rhythmicity.

Authors:  Mirko Pegoraro; Eran Tauber
Journal:  J Genet       Date:  2008-12       Impact factor: 1.166

Review 5.  Noncoding RNA in development.

Authors:  Paulo P Amaral; John S Mattick
Journal:  Mamm Genome       Date:  2008-10-07       Impact factor: 2.957

6.  A computational approach to the functional clustering of periodic gene-expression profiles.

Authors:  Bong-Rae Kim; Li Zhang; Arthur Berg; Jianqing Fan; Rongling Wu
Journal:  Genetics       Date:  2008-09-09       Impact factor: 4.562

Review 7.  RNA surveillance: molecular approaches in transcript quality control and their implications in clinical diseases.

Authors:  Karen C M Moraes
Journal:  Mol Med       Date:  2009-10-07       Impact factor: 6.354

Review 8.  The genetics of circadian rhythms in Neurospora.

Authors:  Patricia L Lakin-Thomas; Deborah Bell-Pedersen; Stuart Brody
Journal:  Adv Genet       Date:  2011       Impact factor: 1.944

9.  Circadian rhythms in Neurospora crassa: dynamics of the clock component frequency visualized using a fluorescent reporter.

Authors:  Ernestina Castro-Longoria; Michael Ferry; Salomón Bartnicki-Garcia; Jeff Hasty; Stuart Brody
Journal:  Fungal Genet Biol       Date:  2010-01-04       Impact factor: 3.495

10.  A pair of partially overlapping Arabidopsis genes with antagonistic circadian expression.

Authors:  Andrea Kunova; Elena Zubko; Peter Meyer
Journal:  Int J Plant Genomics       Date:  2012-04-03
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