Literature DB >> 19147939

The role of microRNAs (miRNA) in circadian rhythmicity.

Mirko Pegoraro1, Eran Tauber.   

Abstract

MicroRNA (miRNA) is a recently discovered new class of small RNA molecules that have a significant role in regulating gene and protein expression. These small RNAs (approximately 22 nt) bind to 3' untranslated regions (3'UTRs) and induce degradation or repression of translation of their mRNA targets. Hundreds of miRNAs have been identified in various organisms and have been shown to play a significant role in development and normal cell functioning. Recently, a few studies have suggested that miRNAs may be an important regulators of circadian rhythmicity, providing a new dimension (posttranscriptional) of our understanding of biological clocks. Here, we describe the mechanisms of miRNA regulation, and recent studies attempting to identify clock miRNAs and their function in the circadian system.

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Year:  2008        PMID: 19147939     DOI: 10.1007/s12041-008-0073-8

Source DB:  PubMed          Journal:  J Genet        ISSN: 0022-1333            Impact factor:   1.166


  73 in total

1.  Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus.

Authors:  Ruth A Akhtar; Akhilesh B Reddy; Elizabeth S Maywood; Jonathan D Clayton; Verdun M King; Andrew G Smith; Timothy W Gant; Michael H Hastings; Charalambos P Kyriacou
Journal:  Curr Biol       Date:  2002-04-02       Impact factor: 10.834

2.  Dissection of floral induction pathways using global expression analysis.

Authors:  Markus Schmid; N Henriette Uhlenhaut; François Godard; Monika Demar; Ray Bressan; Detlef Weigel; Jan U Lohmann
Journal:  Development       Date:  2003-10-22       Impact factor: 6.868

Review 3.  Post-translational modifications regulate the ticking of the circadian clock.

Authors:  Monica Gallego; David M Virshup
Journal:  Nat Rev Mol Cell Biol       Date:  2007-02       Impact factor: 94.444

4.  MicroRNAs direct rapid deadenylation of mRNA.

Authors:  Ligang Wu; Jihua Fan; Joel G Belasco
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-22       Impact factor: 11.205

5.  Rhythmic expression of adenylyl cyclase VI contributes to the differential regulation of serotonin N-acetyltransferase by bradykinin in rat pineal glands.

Authors:  Sung Han; Tae-Don Kim; Dae-Cheong Ha; Kyong-Tai Kim
Journal:  J Biol Chem       Date:  2005-09-15       Impact factor: 5.157

6.  Genome-wide transcriptional orchestration of circadian rhythms in Drosophila.

Authors:  Hiroki R Ueda; Akira Matsumoto; Miho Kawamura; Masamitsu Iino; Teiichi Tanimura; Seiichi Hashimoto
Journal:  J Biol Chem       Date:  2002-02-19       Impact factor: 5.157

7.  Human let-7a miRNA blocks protein production on actively translating polyribosomes.

Authors:  Stephanie Nottrott; Martin J Simard; Joel D Richter
Journal:  Nat Struct Mol Biol       Date:  2006-11-26       Impact factor: 15.369

8.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

9.  microRNA target predictions across seven Drosophila species and comparison to mammalian targets.

Authors:  Dominic Grün; Yi-Lu Wang; David Langenberger; Kristin C Gunsalus; Nikolaus Rajewsky
Journal:  PLoS Comput Biol       Date:  2005-06-24       Impact factor: 4.475

10.  Meta-analysis of Drosophila circadian microarray studies identifies a novel set of rhythmically expressed genes.

Authors:  Kevin P Keegan; Suraj Pradhan; Ji-Ping Wang; Ravi Allada
Journal:  PLoS Comput Biol       Date:  2007-09-11       Impact factor: 4.475

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  21 in total

Review 1.  Circadian rhythms and mood regulation: insights from pre-clinical models.

Authors:  Colleen A McClung
Journal:  Eur Neuropsychopharmacol       Date:  2011-08-11       Impact factor: 4.600

2.  Comprehensive analysis of microRNA-mRNA co-expression in circadian rhythm.

Authors:  Young Ji Na; Jung Hwan Sung; Suk Chan Lee; Young Ju Lee; Yeun Joo Choi; Woong Yang Park; Hee Sup Shin; Ju Han Kim
Journal:  Exp Mol Med       Date:  2009-09-30       Impact factor: 8.718

Review 3.  RNA surveillance: molecular approaches in transcript quality control and their implications in clinical diseases.

Authors:  Karen C M Moraes
Journal:  Mol Med       Date:  2009-10-07       Impact factor: 6.354

4.  MicroRNA 132 alters sleep and varies with time in brain.

Authors:  Christopher J Davis; James M Clinton; Ping Taishi; Stewart G Bohnet; Kimberly A Honn; James M Krueger
Journal:  J Appl Physiol (1985)       Date:  2011-06-30

Review 5.  Epigenetic mechanisms underlying cardiac degeneration and regeneration.

Authors:  Pankaj Chaturvedi; Suresh C Tyagi
Journal:  Int J Cardiol       Date:  2014-02-20       Impact factor: 4.164

Review 6.  Minutes, days and years: molecular interactions among different scales of biological timing.

Authors:  Diego A Golombek; Ivana L Bussi; Patricia V Agostino
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-01-20       Impact factor: 6.237

Review 7.  Role of clock genes in gastrointestinal motility.

Authors:  Willemijntje A Hoogerwerf
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2010-06-17       Impact factor: 4.052

Review 8.  Epigenetics and cardiovascular disease.

Authors:  José M Ordovás; Caren E Smith
Journal:  Nat Rev Cardiol       Date:  2010-07-06       Impact factor: 32.419

9.  Xenopus Bsx links daily cell cycle rhythms and pineal photoreceptor fate.

Authors:  Silvia D'Autilia; Vania Broccoli; Giuseppina Barsacchi; Massimiliano Andreazzoli
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

Review 10.  The circadian clock in the kidney.

Authors:  Lisa R Stow; Michelle L Gumz
Journal:  J Am Soc Nephrol       Date:  2011-03-24       Impact factor: 10.121

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