Literature DB >> 16761955

How plants tell the time.

Michael J Gardner1, Katharine E Hubbard, Carlos T Hotta, Antony N Dodd, Alex A R Webb.   

Abstract

Plants, like all eukaryotes and most prokaryotes, have evolved sophisticated mechanisms for anticipating predictable environmental changes that arise due to the rotation of the Earth on its axis. These mechanisms are collectively termed the circadian clock. Many aspects of plant physiology, metabolism and development are under circadian control and a large proportion of the transcriptome exhibits circadian regulation. In the present review, we describe the advances in determining the molecular nature of the circadian oscillator and propose an architecture of several interlocking negative-feedback loops. The adaptive advantages of circadian control, with particular reference to the regulation of metabolism, are also considered. We review the evidence for the presence of multiple circadian oscillator types located in within individual cells and in different tissues.

Mesh:

Year:  2006        PMID: 16761955      PMCID: PMC1479754          DOI: 10.1042/BJ20060484

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  116 in total

Review 1.  All in good time: the Arabidopsis circadian clock.

Authors:  S Barak; E M Tobin; C Andronis; S Sugano; R M Green
Journal:  Trends Plant Sci       Date:  2000-12       Impact factor: 18.313

2.  Orchestrated transcription of key pathways in Arabidopsis by the circadian clock.

Authors:  S L Harmer; J B Hogenesch; M Straume; H S Chang; B Han; T Zhu; X Wang; J A Kreps; S A Kay
Journal:  Science       Date:  2000-12-15       Impact factor: 47.728

3.  Circadian dysfunction causes aberrant hypocotyl elongation patterns in Arabidopsis.

Authors:  M J Dowson-Day; A J Millar
Journal:  Plant J       Date:  1999-01       Impact factor: 6.417

Review 4.  Molecular bases of circadian rhythms.

Authors:  S L Harmer; S Panda; S A Kay
Journal:  Annu Rev Cell Dev Biol       Date:  2001       Impact factor: 13.827

Review 5.  Time zones: a comparative genetics of circadian clocks.

Authors:  M W Young; S A Kay
Journal:  Nat Rev Genet       Date:  2001-09       Impact factor: 53.242

Review 6.  Posttranscriptional and posttranslational regulation of clock genes.

Authors:  Emily Harms; Saul Kivimäe; Michael W Young; Lino Saez
Journal:  J Biol Rhythms       Date:  2004-10       Impact factor: 3.182

7.  A role for LKP2 in the circadian clock of Arabidopsis.

Authors:  T F Schultz; T Kiyosue; M Yanovsky; M Wada; S A Kay
Journal:  Plant Cell       Date:  2001-12       Impact factor: 11.277

8.  Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis.

Authors:  David Alabadí; Marcelo J Yanovsky; Paloma Más; Stacey L Harmer; Steve A Kay
Journal:  Curr Biol       Date:  2002-04-30       Impact factor: 10.834

9.  sn-1,2-diacylglycerol levels in the fungus Neurospora crassa display circadian rhythmicity.

Authors:  M Ramsdale; P L Lakin-Thomas
Journal:  J Biol Chem       Date:  2000-09-08       Impact factor: 5.157

10.  FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis.

Authors:  D C Nelson; J Lasswell; L E Rogg; M A Cohen; B Bartel
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

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  46 in total

1.  Two-component signaling elements and histidyl-aspartyl phosphorelays.

Authors:  G Eric Schaller; Joseph J Kieber; Shin-Han Shiu
Journal:  Arabidopsis Book       Date:  2008-07-14

2.  Lunisolar tidal force and the growth of plant roots, and some other of its effects on plant movements.

Authors:  Peter W Barlow; Joachim Fisahn
Journal:  Ann Bot       Date:  2012-03-20       Impact factor: 4.357

3.  PRR5 regulates phosphorylation, nuclear import and subnuclear localization of TOC1 in the Arabidopsis circadian clock.

Authors:  Lei Wang; Sumire Fujiwara; David E Somers
Journal:  EMBO J       Date:  2010-04-20       Impact factor: 11.598

4.  Correct biological timing in Arabidopsis requires multiple light-signaling pathways.

Authors:  Neil Dalchau; Katharine E Hubbard; Fiona C Robertson; Carlos T Hotta; Helen M Briggs; Guy-Bart Stan; Jorge M Gonçalves; Alex A R Webb
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-01       Impact factor: 11.205

5.  Induction of BAP1 by a moderate decrease in temperature is mediated by ICE1 in Arabidopsis.

Authors:  Ying Zhu; Huijun Yang; Hyung-Gon Mang; Jian Hua
Journal:  Plant Physiol       Date:  2010-11-22       Impact factor: 8.340

6.  Light-dependent regulation of cell division in Ostreococcus: evidence for a major transcriptional input.

Authors:  Mickael Moulager; Annabelle Monnier; Béline Jesson; Régis Bouvet; Jean Mosser; Christian Schwartz; Lionel Garnier; Florence Corellou; François-Yves Bouget
Journal:  Plant Physiol       Date:  2007-05-25       Impact factor: 8.340

Review 7.  Sex differences in circadian timing systems: implications for disease.

Authors:  Matthew Bailey; Rae Silver
Journal:  Front Neuroendocrinol       Date:  2013-11-25       Impact factor: 8.606

8.  Distinct light and clock modulation of cytosolic free Ca2+ oscillations and rhythmic CHLOROPHYLL A/B BINDING PROTEIN2 promoter activity in Arabidopsis.

Authors:  Xiaodong Xu; Carlos T Hotta; Antony N Dodd; John Love; Robert Sharrock; Young Wha Lee; Qiguang Xie; Carl H Johnson; Alex A R Webb
Journal:  Plant Cell       Date:  2007-11-02       Impact factor: 11.277

9.  Diurnal and circadian rhythms in the tomato transcriptome and their modulation by cryptochrome photoreceptors.

Authors:  Paolo Facella; Loredana Lopez; Fabrizio Carbone; David W Galbraith; Giovanni Giuliano; Gaetano Perrotta
Journal:  PLoS One       Date:  2008-07-30       Impact factor: 3.240

Review 10.  Molecular mechanisms of polyploidy and hybrid vigor.

Authors:  Z Jeffrey Chen
Journal:  Trends Plant Sci       Date:  2010-01-18       Impact factor: 18.313

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