Literature DB >> 15134460

Short sequences of non-proline residues can adopt the polyproline II helical conformation.

Brian W Chellgren1, Trevor P Creamer.   

Abstract

The left-handed polyproline II (P(II)) helix is a structure that has been given a great deal of attention lately because of its role in a wide variety of physiologically important processes and potential significance in protein unfolded states. Recent work by several authors has shown that residues besides proline can adopt this structure. A scale of relative P(II)-helix-forming propensities has been generated but only for single guest residues in a proline-based host system. Here, we present multiple guest residues in a proline-based host system. Using circular dichroism spectroscopy, we have shown that not only single residues, but also short sequences of non-proline residues can adopt the P(II) conformation.

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Year:  2004        PMID: 15134460     DOI: 10.1021/bi049922v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  27 in total

1.  Chaperone-like N-methyl peptide inhibitors of polyglutamine aggregation.

Authors:  Jennifer D Lanning; Andrew J Hawk; Johnmark Derryberry; Stephen C Meredith
Journal:  Biochemistry       Date:  2010-08-24       Impact factor: 3.162

2.  A novel method reveals that solvent water favors polyproline II over beta-strand conformation in peptides and unfolded proteins: conditional hydrophobic accessible surface area (CHASA).

Authors:  Patrick J Fleming; Nicholas C Fitzkee; Mihaly Mezei; Rajgopal Srinivasan; George D Rose
Journal:  Protein Sci       Date:  2004-12-02       Impact factor: 6.725

3.  Probing site-specific conformational distributions in protein folding with solid-state NMR.

Authors:  Robert H Havlin; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-17       Impact factor: 11.205

4.  Statistical coil model of the unfolded state: resolving the reconciliation problem.

Authors:  Abhishek K Jha; Andrés Colubri; Karl F Freed; Tobin R Sosnick
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-30       Impact factor: 11.205

Review 5.  Protein-solvent interactions.

Authors:  Ninad Prabhu; Kim Sharp
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

6.  Further evidence for the absence of polyproline II stretch in the XAO peptide.

Authors:  Joanna Makowska; Sylwia Rodziewicz-Motowidlo; Katarzyna Baginska; Mariusz Makowski; Jorge A Vila; Adam Liwo; Lech Chmurzynski; Harold A Scheraga
Journal:  Biophys J       Date:  2007-02-02       Impact factor: 4.033

7.  Stereoelectronic effects on polyproline conformation.

Authors:  Jia-Cherng Horng; Ronald T Raines
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

8.  The alanine-rich XAO peptide adopts a heterogeneous population, including turn-like and polyproline II conformations.

Authors:  Reinhard Schweitzer-Stenner; Thomas J Measey
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-06       Impact factor: 11.205

9.  Stereoelectronic effects on the transition barrier of polyproline conformational interconversion.

Authors:  Yi-Chun Chiang; Yu-Ju Lin; Jia-Cherng Horng
Journal:  Protein Sci       Date:  2009-09       Impact factor: 6.725

10.  Conformational Properties of Helical Protein Polymers with Varying Densities of Chemically Reactive Groups.

Authors:  Robin S Farmer; Lindsey M Argust; Jared D Sharp; Kristi L Kiick
Journal:  Macromolecules       Date:  2006       Impact factor: 5.985

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