Literature DB >> 15125062

Mutation accumulation and the effect of copia insertions in Drosophila melanogaster.

David Houle1, Sergey V Nuzhdin.   

Abstract

Repeated efforts to estimate the genomic deleterious mutation rate per generation (U) in Drosophila melanogaster have yielded inconsistent estimates ranging from 0.01 to nearly 1. We carried out a mutation-accumulation experiment with a cryopreserved control population in hopes of resolving some of the uncertainties raised by these estimates. Mutation accumulation (MA) was carried out by brother sister mating of 150 sublines derived from two inbred lines. Fitness was measured under conditions chosen to mimic the ancestral laboratory environment of these genotypes. We monitored the insertions of a transposable element, copia, that proved to accumulate at the unusually high rate of 0.24 per genome per generation in one of our MA lines. Mutational variance in fitness increased at a rate consistent with previous studies, yielding a mutational coefficient of variation greater than 3%. The performance of the cryopreserved control relative to the MA lines was inconsistent, so estimates of mutation rate by the Bateman-Mukai method are suspect. Taken at face value, these data suggest a modest decline in fitness of about 0.3% per generation. The element number of copia was a significant predictor of fitness within generations; on average, insertions caused a 0.76% loss in fitness, although the confidence limits on this estimate are wide.

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Year:  2004        PMID: 15125062     DOI: 10.1017/s0016672303006505

Source DB:  PubMed          Journal:  Genet Res        ISSN: 0016-6723            Impact factor:   1.588


  31 in total

1.  Rapid decline in fitness of mutation accumulation lines of gonochoristic (outcrossing) Caenorhabditis nematodes.

Authors:  Charles F Baer; Joanna Joyner-Matos; Dejerianne Ostrow; Veronica Grigaltchik; Matthew P Salomon; Ambuj Upadhyay
Journal:  Evolution       Date:  2010-11       Impact factor: 3.694

Review 2.  Measurements of spontaneous rates of mutations in the recent past and the near future.

Authors:  Fyodor A Kondrashov; Alexey S Kondrashov
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-27       Impact factor: 6.237

3.  Genetic variation of copia suppression in Drosophila melanogaster.

Authors:  W Vu; S Nuzhdin
Journal:  Heredity (Edinb)       Date:  2010-07-07       Impact factor: 3.821

4.  The first steps of transposable elements invasion: parasitic strategy vs. genetic drift.

Authors:  Arnaud Le Rouzic; Pierre Capy
Journal:  Genetics       Date:  2005-02       Impact factor: 4.562

5.  Characterization of active R2 retrotransposition in the rDNA locus of Drosophila simulans.

Authors:  Xian Zhang; Thomas H Eickbush
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

6.  Persistence time of loss-of-function mutations at nonessential loci affecting eye color in Drosophila melanogaster.

Authors:  Lev Y Yampolsky; Chenoa Allen; Svetlana A Shabalina; Alexey S Kondrashov
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

7.  Population genetics models of competition between transposable element subfamilies.

Authors:  Arnaud Le Rouzic; Pierre Capy
Journal:  Genetics       Date:  2006-08-03       Impact factor: 4.562

8.  Deleterious genomic mutation rate for viability in Drosophila melanogaster using concomitant sibling controls.

Authors:  Yi Gong; R C Woodruff; J N Thompson
Journal:  Biol Lett       Date:  2005-12-22       Impact factor: 3.703

9.  Low impact of germline transposition on the rate of mildly deleterious mutation in Caenorhabditis elegans.

Authors:  Mattieu Bégin; Daniel J Schoen
Journal:  Genetics       Date:  2006-10-22       Impact factor: 4.562

10.  Long-term evolution of transposable elements.

Authors:  Arnaud Le Rouzic; Thibaud S Boutin; Pierre Capy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-26       Impact factor: 11.205

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