Literature DB >> 16118190

Persistence time of loss-of-function mutations at nonessential loci affecting eye color in Drosophila melanogaster.

Lev Y Yampolsky1, Chenoa Allen, Svetlana A Shabalina, Alexey S Kondrashov.   

Abstract

Persistence time of a mutant allele, the expected number of generations before its elimination from the population, can be estimated as the ratio of the number of segregating mutations per individual over the mutation rate per generation. We screened two natural populations of Drosophila melanogaster for mutations causing clear-cut eye phenotypes and detected 25 mutant alleles, falling into 19 complementation groups, in 1164 haploid genomes, which implies 0.021 eye mutations/genome. The de novo haploid mutation rate for the same set of loci was estimated as 2 x 10(-4) in a 10-generation mutation-accumulation experiment. Thus, the average persistence time of all mutations causing clear-cut eye phenotypes is approximately 100 generations (95% confidence interval: 61-219). This estimate shows that the strength of selection against phenotypically drastic alleles of nonessential loci is close to that against recessive lethals. In both cases, deleterious alleles are apparently eliminated by selection against heterozygous individuals, which show no visible phenotypic differences from wild type.

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Year:  2005        PMID: 16118190      PMCID: PMC1456115          DOI: 10.1534/genetics.105.046094

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  27 in total

Review 1.  Terumi Mukai and the riddle of deleterious mutation rates.

Authors:  P D Keightley; A Eyre-Walker
Journal:  Genetics       Date:  1999-10       Impact factor: 4.562

2.  Prediction of deleterious human alleles.

Authors:  S Sunyaev; V Ramensky; I Koch; W Lathe; A S Kondrashov; P Bork
Journal:  Hum Mol Genet       Date:  2001-03-15       Impact factor: 6.150

3.  Protein dispensability and rate of evolution.

Authors:  A E Hirsh; H B Fraser
Journal:  Nature       Date:  2001-06-28       Impact factor: 49.962

4.  Deleterious mutations, apparent stabilizing selection and the maintenance of quantitative variation.

Authors:  A S Kondrashov; M Turelli
Journal:  Genetics       Date:  1992-10       Impact factor: 4.562

5.  THE GENETIC STRUCTURE OF NATURAL POPULATIONS OF DROSOPHILA MELANOGASTER. I. SPONTANEOUS MUTATION RATE OF POLYGENES CONTROLLING VIABILITY.

Authors:  T MUKAI
Journal:  Genetics       Date:  1964-07       Impact factor: 4.562

6.  Molecular nature of 11 spontaneous de novo mutations in Drosophila melanogaster.

Authors:  H P Yang; A Y Tanikawa; A S Kondrashov
Journal:  Genetics       Date:  2001-03       Impact factor: 4.562

7.  Rate of protein evolution versus fitness effect of gene deletion.

Authors:  Jing Yang; Zhenglong Gu; Wen-Hsiung Li
Journal:  Mol Biol Evol       Date:  2003-04-02       Impact factor: 16.240

8.  Do essential genes evolve slowly?

Authors:  L D Hurst; N G Smith
Journal:  Curr Biol       Date:  1999-07-15       Impact factor: 10.834

Review 9.  A fly's eye view of biology.

Authors:  B J Thomas; D A Wassarman
Journal:  Trends Genet       Date:  1999-05       Impact factor: 11.639

10.  The FlyBase database of the Drosophila genome projects and community literature.

Authors: 
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

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