Literature DB >> 15103154

Preliminary X-ray analysis of a human V(H) fragment at 1.8 A resolution.

Rajneesh Kumar Gaur1, Michael B Kupper, Rainer Fischer, Kurt M V Hoffmann.   

Abstract

Small antibody fragments are more useful than full-size antibodies for achieving efficient biodistribution. As a first step towards the design of a clinically desirable antibody fragment, the crystallization of a human V(H) fragment has been achieved. The fragment was derived from the single-chain antibody scFvM12, which recognizes a cancer-specific hypoglycosylated form of mucin. The V(H) fragment was obtained by in-drop digestion of the scFvM12 with a low concentration of the broad-spectrum protease subtilisin Carlsberg. The crystal belongs to the monoclinic space group C2. The crystal diffracted to 1.8 A resolution when analysed at 100 K using a rotating-anode X-ray generator.

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Year:  2004        PMID: 15103154     DOI: 10.1107/S0907444904004834

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  'Seeding' with protease to optimize protein crystallization conditions in in situ proteolysis.

Authors:  Jinguang Huang; Yanmei Gong; Dan Huang; Lesley Haire; Junfeng Liu; Youliang Peng
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-04-24

2.  The use of in situ proteolysis in the crystallization of murine CstF-77.

Authors:  Yun Bai; Thierry C Auperin; Liang Tong
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-01-27

3.  A serendipitous discovery that in situ proteolysis is essential for the crystallization of yeast CPSF-100 (Ydh1p).

Authors:  Corey R Mandel; Damara Gebauer; Hailong Zhang; Liang Tong
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-09-30

4.  In situ proteolysis for protein crystallization and structure determination.

Authors:  Aiping Dong; Xiaohui Xu; Aled M Edwards; Changsoo Chang; Maksymilian Chruszcz; Marianne Cuff; Marcin Cymborowski; Rosa Di Leo; Olga Egorova; Elena Evdokimova; Ekaterina Filippova; Jun Gu; Jennifer Guthrie; Alexandr Ignatchenko; Andrzej Joachimiak; Natalie Klostermann; Youngchang Kim; Yuri Korniyenko; Wladek Minor; Qiuni Que; Alexei Savchenko; Tatiana Skarina; Kemin Tan; Alexander Yakunin; Adelinda Yee; Veronica Yim; Rongguang Zhang; Hong Zheng; Masato Akutsu; Cheryl Arrowsmith; George V Avvakumov; Alexey Bochkarev; Lars-Göran Dahlgren; Sirano Dhe-Paganon; Slav Dimov; Ludmila Dombrovski; Patrick Finerty; Susanne Flodin; Alex Flores; Susanne Gräslund; Martin Hammerström; Maria Dolores Herman; Bum-Soo Hong; Raymond Hui; Ida Johansson; Yongson Liu; Martina Nilsson; Lyudmila Nedyalkova; Pär Nordlund; Tomas Nyman; Jinrong Min; Hui Ouyang; Hee-won Park; Chao Qi; Wael Rabeh; Limin Shen; Yang Shen; Deepthi Sukumard; Wolfram Tempel; Yufeng Tong; Lionel Tresagues; Masoud Vedadi; John R Walker; Johan Weigelt; Martin Welin; Hong Wu; Ting Xiao; Hong Zeng; Haizhong Zhu
Journal:  Nat Methods       Date:  2007-11-04       Impact factor: 28.547

5.  In Situ Proteolysis for Crystallization of Membrane Bound Cytochrome P450 17A1 and 17A2 Proteins from Zebrafish.

Authors:  Li Lei; Martin Egli
Journal:  Curr Protoc Protein Sci       Date:  2016-04-01

6.  Expression, limited proteolysis and preliminary crystallographic analysis of IpaD, a component of the Shigella flexneri type III secretion system.

Authors:  Steven Johnson; Pietro Roversi; Marianela Espina; Janet E Deane; Susan Birket; William D Picking; Ariel Blocker; Wendy L Picking; Susan M Lea
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-08-11
  6 in total

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