Literature DB >> 15064768

The genome sequence of the extreme thermophile Thermus thermophilus.

Anke Henne1, Holger Brüggemann, Carsten Raasch, Arnim Wiezer, Thomas Hartsch, Heiko Liesegang, Andre Johann, Tanja Lienard, Olivia Gohl, Rosa Martinez-Arias, Carsten Jacobi, Vytaute Starkuviene, Silke Schlenczeck, Silke Dencker, Robert Huber, Hans-Peter Klenk, Wilfried Kramer, Rainer Merkl, Gerhard Gottschalk, Hans-Joachim Fritz.   

Abstract

Thermus thermophilus HB27 is an extremely thermophilic, halotolerant bacterium, which was originally isolated from a natural thermal environment in Japan. This organism has considerable biotechnological potential; many thermostable proteins isolated from members of the genus Thermus are indispensable in research and in industrial applications. We present here the complete genome sequence of T. thermophilus HB27, the first for the genus Thermus. The genome consists of a 1,894,877 base pair chromosome and a 232,605 base pair megaplasmid, designated pTT27. The 2,218 identified putative genes were compared to those of the closest relative sequenced so far, the mesophilic bacterium Deinococcus radiodurans. Both organisms share a similar set of proteins, although their genomes lack extensive synteny. Many new genes of potential interest for biotechnological applications were found in T. thermophilus HB27. Candidates include various proteases and key enzymes of other fundamental biological processes such as DNA replication, DNA repair and RNA maturation.

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Year:  2004        PMID: 15064768     DOI: 10.1038/nbt956

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  133 in total

1.  Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria.

Authors:  Thorsten Brinkhoff; Doreen Fischer; John Vollmers; Sonja Voget; Christine Beardsley; Sebastian Thole; Marc Mussmann; Brigitte Kunze; Irene Wagner-Döbler; Rolf Daniel; Meinhard Simon
Journal:  ISME J       Date:  2011-12-22       Impact factor: 10.302

2.  Draft genome sequence of Thermus sp. strain RL, isolated from a hot water spring located atop the Himalayan ranges at Manikaran, India.

Authors:  Vatsala Dwivedi; Naseer Sangwan; Aeshna Nigam; Nidhi Garg; Neha Niharika; Paramjit Khurana; Jitendra P Khurana; Rup Lal
Journal:  J Bacteriol       Date:  2012-07       Impact factor: 3.490

3.  A novel heme a insertion factor gene cotranscribes with the Thermus thermophilus cytochrome ba3 oxidase locus.

Authors:  Carolin Werner; Oliver-Matthias H Richter; Bernd Ludwig
Journal:  J Bacteriol       Date:  2010-07-09       Impact factor: 3.490

4.  Purification and characterization of a hyperthermostable Mn-superoxide dismutase from Thermus thermophilus HB27.

Authors:  Jianguo Liu; Mengmeng Yin; Hu Zhu; Jianren Lu; Zhanfeng Cui
Journal:  Extremophiles       Date:  2011-01-01       Impact factor: 2.395

5.  An extreme thermophile, Thermus thermophilus, is a polyploid bacterium.

Authors:  Naoto Ohtani; Masaru Tomita; Mitsuhiro Itaya
Journal:  J Bacteriol       Date:  2010-08-20       Impact factor: 3.490

Review 6.  New extremophilic lipases and esterases from metagenomics.

Authors:  Olalla López-López; Maria E Cerdán; Maria I González Siso
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

7.  Stimulation of expression of a silica-induced protein (Sip) in Thermus thermophilus by supersaturated silicic acid.

Authors:  Katsumi Doi; Yasuhiro Fujino; Fumio Inagaki; Ryouichi Kawatsu; Miki Tahara; Toshihisa Ohshima; Yoshihiro Okaue; Takushi Yokoyama; Satoru Iwai; Seiya Ogata
Journal:  Appl Environ Microbiol       Date:  2009-02-20       Impact factor: 4.792

8.  Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus.

Authors:  Tomoya Tsukazaki; Hiroyuki Mori; Shuya Fukai; Tomoyuki Numata; Anna Perederina; Hiroaki Adachi; Hiroyoshi Matsumura; Kazufumi Takano; Satoshi Murakami; Tsuyoshi Inoue; Yusuke Mori; Takatomo Sasaki; Dmitry G Vassylyev; Osamu Nureki; Koreaki Ito
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-03-25

9.  Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus.

Authors:  Hideto Takami; Yoshihiro Takaki; Gab-Joo Chee; Shinro Nishi; Shigeru Shimamura; Hiroko Suzuki; Satomi Matsui; Ikuo Uchiyama
Journal:  Nucleic Acids Res       Date:  2004-12-01       Impact factor: 16.971

10.  Novel stand-alone RAM domain protein-mediated catalytic control of anthranilate phosphoribosyltransferase in tryptophan biosynthesis in Thermus thermophilus.

Authors:  Tetsuo Kubota; Hajime Matsushita; Takeo Tomita; Saori Kosono; Minoru Yoshida; Tomohisa Kuzuyama; Makoto Nishiyama
Journal:  Extremophiles       Date:  2016-10-19       Impact factor: 2.395

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