Literature DB >> 22689228

Draft genome sequence of Thermus sp. strain RL, isolated from a hot water spring located atop the Himalayan ranges at Manikaran, India.

Vatsala Dwivedi1, Naseer Sangwan, Aeshna Nigam, Nidhi Garg, Neha Niharika, Paramjit Khurana, Jitendra P Khurana, Rup Lal.   

Abstract

Thermus sp. strain RL was isolated from a hot water spring (90°C to 98°C) at Manikaran, Himachal Pradesh, India. Here we report the draft genome sequence (20,36,600 bp) of this strain. The draft genome sequence consists of 17 contigs and 1,986 protein-coding sequences and has an average G+C content of 68.77%.

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Year:  2012        PMID： 22689228      PMCID： PMC3434741          DOI： 10.1128/JB.00604-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  10 in total

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Journal:  Bioinformatics       Date:  2004-10-28       Impact factor: 6.937

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Journal:  J Bacteriol       Date:  2012-03       Impact factor: 3.490

7.  The genome sequence of the extreme thermophile Thermus thermophilus.

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8.  Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01.

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Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
  10 in total
  10 in total

Review 1.  Survey of (Meta)genomic Approaches for Understanding Microbial Community Dynamics.

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2.  Fish Gut Microbiome: Current Approaches and Future Perspectives.

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Journal:  Indian J Microbiol       Date:  2018-08-27       Impact factor: 2.461

Review 3.  Bacterial diversity in 110 thermal hot springs of Indian Himalayan Region (IHR).

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4.  Thermus parvatiensis RL(T) sp. nov., Isolated from a Hot Water Spring, Located Atop the Himalayan Ranges at Manikaran, India.

Authors:  Vatsala Dwivedi; Kirti Kumari; Sanjay Kumar Gupta; Rekha Kumari; Charu Tripathi; Pushp Lata; Neha Niharika; Amit Kumar Singh; Roshan Kumar; Aeshna Nigam; Nidhi Garg; Rup Lal
Journal:  Indian J Microbiol       Date:  2015-06-14       Impact factor: 2.461

5.  Complete Genome Sequence of Thermus aquaticus Y51MC23.

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6.  Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species.

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7.  Complete genome sequence of Thermus brockianus GE-1 reveals key enzymes of xylan/xylose metabolism.

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8.  Complete Genome Analysis of Thermus parvatiensis and Comparative Genomics of Thermus spp. Provide Insights into Genetic Variability and Evolution of Natural Competence as Strategic Survival Attributes.

Authors:  Charu Tripathi; Harshita Mishra; Himani Khurana; Vatsala Dwivedi; Komal Kamra; Ram K Negi; Rup Lal
Journal:  Front Microbiol       Date:  2017-07-27       Impact factor: 5.640

9.  Draft Genome Sequence of Deinococcus sp. Strain RL Isolated from Sediments of a Hot Water Spring.

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10.  Draft Genome Sequence of Cellulosimicrobium sp. Strain MM, Isolated from Arsenic-Rich Microbial Mats of a Himalayan Hot Spring.

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  10 in total

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