Literature DB >> 15024087

Loss of translational control in yeast compromised for the major mRNA decay pathway.

L E A Holmes1, S G Campbell, S K De Long, A B Sachs, M P Ashe.   

Abstract

The cytoplasmic fate of mRNAs is dictated by the relative activities of the intimately connected mRNA decay and translation initiation pathways. In this study, we have found that yeast strains compromised for stages downstream of deadenylation in the major mRNA decay pathway are incapable of inhibiting global translation initiation in response to stress. In the past, the paradigm of the eIF2alpha kinase-dependent amino acid starvation pathway in yeast has been used to evaluate this highly conserved stress response in all eukaryotic cells. Using a similar approach we have found that even though the mRNA decay mutants maintain high levels of general translation, they exhibit many of the hallmarks of amino acid starvation, including increased eIF2alpha phosphorylation and activated GCN4 mRNA translation. Therefore, these mutants appear translationally oblivious to decreased ternary complex abundance, and we propose that this is due to higher rates of mRNA recruitment to the 40S ribosomal subunit.

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Year:  2004        PMID: 15024087      PMCID: PMC371117          DOI: 10.1128/MCB.24.7.2998-3010.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

1.  Analysis of mutations in the yeast mRNA decapping enzyme.

Authors:  S Tharun; R Parker
Journal:  Genetics       Date:  1999-04       Impact factor: 4.562

2.  Global and specific translational regulation in the genomic response of Saccharomyces cerevisiae to a rapid transfer from a fermentable to a nonfermentable carbon source.

Authors:  K M Kuhn; J L DeRisi; P O Brown; P Sarnow
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

3.  TOR modulates GCN4-dependent expression of genes turned on by nitrogen limitation.

Authors:  L Valenzuela; C Aranda; A González
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

Review 4.  Translation initiation: adept at adapting.

Authors:  T E Dever
Journal:  Trends Biochem Sci       Date:  1999-10       Impact factor: 13.807

5.  Glucose limitation induces GCN4 translation by activation of Gcn2 protein kinase.

Authors:  R Yang; S A Wek; R C Wek
Journal:  Mol Cell Biol       Date:  2000-04       Impact factor: 4.272

6.  The protein kinase Gcn2p mediates sodium toxicity in yeast.

Authors:  A Goossens; T E Dever; A Pascual-Ahuir; R Serrano
Journal:  J Biol Chem       Date:  2001-06-14       Impact factor: 5.157

Review 7.  Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae.

Authors:  M Tucker; R Parker
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

8.  Yeast Sm-like proteins function in mRNA decapping and decay.

Authors:  S Tharun; W He; A E Mayes; P Lennertz; J D Beggs; R Parker
Journal:  Nature       Date:  2000-03-30       Impact factor: 49.962

9.  Linking the 3' poly(A) tail to the subunit joining step of translation initiation: relations of Pab1p, eukaryotic translation initiation factor 5b (Fun12p), and Ski2p-Slh1p.

Authors:  A Searfoss; T E Dever; R Wickner
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

10.  Genome-wide protein interaction screens reveal functional networks involving Sm-like proteins.

Authors:  M Fromont-Racine; A E Mayes; A Brunet-Simon; J C Rain; A Colley; I Dix; L Decourty; N Joly; F Ricard; J D Beggs; P Legrain
Journal:  Yeast       Date:  2000-06-30       Impact factor: 3.239

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  52 in total

Review 1.  Alternative ways to think about cellular internal ribosome entry.

Authors:  Wendy V Gilbert
Journal:  J Biol Chem       Date:  2010-06-24       Impact factor: 5.157

2.  General translational repression by activators of mRNA decapping.

Authors:  Jeff Coller; Roy Parker
Journal:  Cell       Date:  2005-09-23       Impact factor: 41.582

3.  Sbp1p affects translational repression and decapping in Saccharomyces cerevisiae.

Authors:  Scott P Segal; Travis Dunckley; Roy Parker
Journal:  Mol Cell Biol       Date:  2006-07       Impact factor: 4.272

4.  Pat1 contains distinct functional domains that promote P-body assembly and activation of decapping.

Authors:  Guy R Pilkington; Roy Parker
Journal:  Mol Cell Biol       Date:  2007-12-17       Impact factor: 4.272

5.  Rapid and reversible nuclear accumulation of cytoplasmic tRNA in response to nutrient availability.

Authors:  Michael L Whitney; Rebecca L Hurto; Hussam H Shaheen; Anita K Hopper
Journal:  Mol Biol Cell       Date:  2007-05-02       Impact factor: 4.138

6.  Crystal structure of human Edc3 and its functional implications.

Authors:  Sharon H M Ling; Carolyn J Decker; Martin A Walsh; Meipei She; Roy Parker; Haiwei Song
Journal:  Mol Cell Biol       Date:  2008-08-04       Impact factor: 4.272

7.  The cytoplasmic mRNA degradation factor Pat1 is required for rRNA processing.

Authors:  Mridula Muppavarapu; Susanne Huch; Tracy Nissan
Journal:  RNA Biol       Date:  2016-02-26       Impact factor: 4.652

8.  Not4-dependent translational repression is important for cellular protein homeostasis in yeast.

Authors:  Steffen Preissler; Julia Reuther; Miriam Koch; Annika Scior; Michael Bruderek; Tancred Frickey; Elke Deuerling
Journal:  EMBO J       Date:  2015-05-13       Impact factor: 11.598

9.  Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae.

Authors:  Muriel Brengues; Roy Parker
Journal:  Mol Biol Cell       Date:  2007-05-02       Impact factor: 4.138

10.  Dendritic LSm1/CBP80-mRNPs mark the early steps of transport commitment and translational control.

Authors:  Alessandra di Penta; Valentina Mercaldo; Fulvio Florenzano; Sebastian Munck; M Teresa Ciotti; Francesca Zalfa; Delio Mercanti; Marco Molinari; Claudia Bagni; Tilmann Achsel
Journal:  J Cell Biol       Date:  2009-02-02       Impact factor: 10.539

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