Literature DB >> 10966469

Mechanisms and control of mRNA decapping in Saccharomyces cerevisiae.

M Tucker1, R Parker.   

Abstract

The process of mRNA turnover is a critical component of the regulation of gene expression. In the past few years a discrete set of pathways for the degradation of polyadenylated mRNAs in eukaryotic cells have been described. A major pathway of mRNA degradation in yeast occurs by deadenylation of the mRNA, which leads to a decapping reaction, thereby exposing the mRNA to rapid 5' to 3' exonucleolytic degradation. A critical step in this pathway is decapping, since it effectively terminates the existence of the mRNA and is the site of numerous control inputs. In this review, we discuss the properties of the decapping enzyme and how its activity is regulated to give rise to differential mRNA turnover. A key point is that decapping appears to be controlled by access of the enzyme to the cap structure in a competition with the translation initiation complex. Strikingly, several proteins required for mRNA decapping show interactions with the translation machinery and suggest possible mechanisms for the triggering of mRNA decapping.

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Year:  2000        PMID: 10966469     DOI: 10.1146/annurev.biochem.69.1.571

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  61 in total

1.  A cis-acting element known to block 3' mRNA degradation enhances expression of polyA-minus mRNA in wild-type yeast cells and phenocopies a ski mutant.

Authors:  J T Brown; A W Johnson
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

2.  Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Authors:  Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

3.  Function of the ski4p (Csl4p) and Ski7p proteins in 3'-to-5' degradation of mRNA.

Authors:  A van Hoof; R R Staples; R E Baker; R Parker
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

4.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

5.  Crystal structure of Dcp1p and its functional implications in mRNA decapping.

Authors:  Meipei She; Carolyn J Decker; Kumar Sundramurthy; Yuying Liu; Nan Chen; Roy Parker; Haiwei Song
Journal:  Nat Struct Mol Biol       Date:  2004-02-01       Impact factor: 15.369

6.  An endonuclease activity similar to Xenopus PMR1 catalyzes the degradation of normal and nonsense-containing human beta-globin mRNA in erythroid cells.

Authors:  Kirsten A Bremer; Audrey Stevens; Daniel R Schoenberg
Journal:  RNA       Date:  2003-09       Impact factor: 4.942

7.  mRNA decay enzymes: decappers conserved between yeast and mammals.

Authors:  Carolyn J Decker; Roy Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-23       Impact factor: 11.205

8.  Identification of mRNA decapping activities and an ARE-regulated 3' to 5' exonuclease activity in trypanosome extracts.

Authors:  Joseph Milone; Jeffrey Wilusz; Vivian Bellofatto
Journal:  Nucleic Acids Res       Date:  2002-09-15       Impact factor: 16.971

9.  Analysis of the products of mRNA decapping and 3'-to-5' decay by denaturing gel electrophoresis.

Authors:  Naomi Bergman; Mateusz Opyrchal; Elizabeth J Bates; Jeffrey Wilusz
Journal:  RNA       Date:  2002-07       Impact factor: 4.942

10.  Rrp47p is an exosome-associated protein required for the 3' processing of stable RNAs.

Authors:  Philip Mitchell; Elisabeth Petfalski; Rym Houalla; Alexandre Podtelejnikov; Matthias Mann; David Tollervey
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

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