Literature DB >> 14871121

Double- and zero-quantum NMR relaxation dispersion experiments sampling millisecond time scale dynamics in proteins.

Vladislav Yu Orekhov1, Dmitry M Korzhnev, Lewis E Kay.   

Abstract

TROSY-based NMR relaxation dispersion experiments that measure the decay of double- and zero-quantum (1)H-(15)N coherences as a function of applied (1)H and (15)N radio frequency (rf) fields are presented for studying millisecond dynamic processes in proteins. These experiments are complementary to existing approaches that measure dispersions of single-quantum (15)N and (1)H magnetization. When combined, data from all four coherences provide a more quantitative picture of dynamics, making it possible to distinguish, for example, between two-site and more complex exchange processes. In addition, a TROSY-based pulse scheme is described for measuring the relaxation of amide (1)H single-quantum magnetization, obtained by a simple modification of the multiple-quantum experiments. The new methodology is applied to a point mutant of the Fyn SH3 domain that exchanges between folded and unfolded states at 25 degrees C.

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Year:  2004        PMID: 14871121     DOI: 10.1021/ja038620y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  32 in total

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Review 3.  Chemical exchange in biomacromolecules: past, present, and future.

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Authors:  Renate Auer; D Flemming Hansen; Philipp Neudecker; Dmitry M Korzhnev; D Ranjith Muhandiram; Robert Konrat; Lewis E Kay
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6.  Quantifying millisecond time-scale exchange in proteins by CPMG relaxation dispersion NMR spectroscopy of side-chain carbonyl groups.

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Journal:  J Biomol NMR       Date:  2011-06-18       Impact factor: 2.835

7.  Measurement of protein unfolding/refolding kinetics and structural characterization of hidden intermediates by NMR relaxation dispersion.

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-11       Impact factor: 11.205

8.  A methyl 1H double quantum CPMG experiment to study protein conformational exchange.

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Review 9.  Using NMR spectroscopy to elucidate the role of molecular motions in enzyme function.

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10.  Probing microsecond time scale dynamics in proteins by methyl (1)H Carr-Purcell-Meiboom-Gill relaxation dispersion NMR measurements. Application to activation of the signaling protein NtrC(r).

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Journal:  J Am Chem Soc       Date:  2010-11-08       Impact factor: 15.419

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