Literature DB >> 16437160

Recruitment of Tup1p and Cti6p regulates heme-deficient expression of Aft1p target genes.

Robert J Crisp1, Erika M Adkins, Emily Kimmel, Jerry Kaplan.   

Abstract

In the budding yeast Saccharomyces cerevisiae, transcription of genes encoding for the high-affinity iron (FET3, FTR1) and copper (CTR1) transporters does not occur in the absence of heme. We show that the Aft1p binding region of the FET3 promoter or the Mac1p binding region of the CTR1 promoter is necessary and sufficient to mediate heme-deficient repression. Transcription is repressed in the absence of heme, and a genetic screen identified Tup1p and Hda1p as being required for transcriptional repression. In contrast to FET3 and CTR1, Aft1p target genes ARN1 and FIT1 are transcribed in the absence of heme. A 14 bp sequence in the ARN1 promoter is necessary and sufficient to permit transcription in the absence of heme. Transcription in the absence of heme required the presence of Cti6p to overcome the effect of Tup1p, and Cti6p was recruited to the ARN1 promoter in the absence of heme. We hypothesize that transcription of the siderophore transporter ARN1 permits yeast to accumulate iron in the absence of oxygen and to deny iron to competing organisms.

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Year:  2006        PMID: 16437160      PMCID: PMC1383541          DOI: 10.1038/sj.emboj.7600961

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  26 in total

1.  TUP1 utilizes histone H3/H2B-specific HDA1 deacetylase to repress gene activity in yeast.

Authors:  J Wu; N Suka; M Carlson; M Grunstein
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

2.  Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1.

Authors:  Manolis Papamichos-Chronakis; Theodoros Petrakis; Eleni Ktistaki; Irini Topalidou; Dimitris Tzamarias
Journal:  Mol Cell       Date:  2002-06       Impact factor: 17.970

Review 3.  Negative and positive regulation of HIF-1: a complex network.

Authors:  Julia I Bárdos; Margaret Ashcroft
Journal:  Biochim Biophys Acta       Date:  2005-07-25

Review 4.  Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes.

Authors:  R L Smith; A D Johnson
Journal:  Trends Biochem Sci       Date:  2000-07       Impact factor: 13.807

5.  Reductive and non-reductive mechanisms of iron assimilation by the yeast Saccharomyces cerevisiae.

Authors:  E Lesuisse; P Labbe
Journal:  J Gen Microbiol       Date:  1989-02

6.  The yeast transcriptome in aerobic and hypoxic conditions: effects of hap1, rox1, rox3 and srb10 deletions.

Authors:  Manuel Becerra; Luis J Lombardía-Ferreira; Nicole C Hauser; Jörg D Hoheisel; Belén Tizon; M Esperanza Cerdán
Journal:  Mol Microbiol       Date:  2002-02       Impact factor: 3.501

Review 7.  Role of the non-respiratory pathways in the utilization of molecular oxygen by Saccharomyces cerevisiae.

Authors:  Eric Rosenfeld; Bertrand Beauvoit
Journal:  Yeast       Date:  2003-10-15       Impact factor: 3.239

8.  Combinatorial control of yeast FET4 gene expression by iron, zinc, and oxygen.

Authors:  Brian M Waters; David J Eide
Journal:  J Biol Chem       Date:  2002-07-02       Impact factor: 5.157

9.  Aft1p and Aft2p mediate iron-responsive gene expression in yeast through related promoter elements.

Authors:  Julian C Rutherford; Shulamit Jaron; Dennis R Winge
Journal:  J Biol Chem       Date:  2003-05-19       Impact factor: 5.157

10.  Regulation of Saccharomyces cerevisiae FET4 by oxygen and iron.

Authors:  Laran T Jensen; Valeria Cizewski Culotta
Journal:  J Mol Biol       Date:  2002-04-26       Impact factor: 5.469

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  15 in total

Review 1.  Response to iron deprivation in Saccharomyces cerevisiae.

Authors:  Caroline C Philpott; Olga Protchenko
Journal:  Eukaryot Cell       Date:  2007-11-09

Review 2.  Mechanisms of iron sensing and regulation in the yeast Saccharomyces cerevisiae.

Authors:  María Teresa Martínez-Pastor; Ana Perea-García; Sergi Puig
Journal:  World J Microbiol Biotechnol       Date:  2017-03-17       Impact factor: 3.312

Review 3.  Metabolic crossroads of iron and copper.

Authors:  James F Collins; Joseph R Prohaska; Mitchell D Knutson
Journal:  Nutr Rev       Date:  2010-03       Impact factor: 7.110

4.  Phosphoinositide [PI(3,5)P2] lipid-dependent regulation of the general transcriptional regulator Tup1.

Authors:  Bong-Kwan Han; Scott D Emr
Journal:  Genes Dev       Date:  2011-05-01       Impact factor: 11.361

5.  Iron regulation through the back door: iron-dependent metabolite levels contribute to transcriptional adaptation to iron deprivation in Saccharomyces cerevisiae.

Authors:  Jessica Ihrig; Anja Hausmann; Anika Hain; Nadine Richter; Iqbal Hamza; Roland Lill; Ulrich Mühlenhoff
Journal:  Eukaryot Cell       Date:  2009-12-11

6.  Identification of FRA1 and FRA2 as genes involved in regulating the yeast iron regulon in response to decreased mitochondrial iron-sulfur cluster synthesis.

Authors:  Attila Kumánovics; Opal S Chen; Liangtao Li; Dustin Bagley; Erika M Adkins; Huilan Lin; Nin N Dingra; Caryn E Outten; Greg Keller; Dennis Winge; Diane M Ward; Jerry Kaplan
Journal:  J Biol Chem       Date:  2008-02-15       Impact factor: 5.157

7.  Modulation of Circadian Gene Expression and Metabolic Compensation by the RCO-1 Corepressor of Neurospora crassa.

Authors:  Consuelo Olivares-Yañez; Jillian Emerson; Arminja Kettenbach; Jennifer J Loros; Jay C Dunlap; Luis F Larrondo
Journal:  Genetics       Date:  2016-07-22       Impact factor: 4.562

8.  Yap5 is an iron-responsive transcriptional activator that regulates vacuolar iron storage in yeast.

Authors:  Liangtao Li; Dustin Bagley; Diane M Ward; Jerry Kaplan
Journal:  Mol Cell Biol       Date:  2007-12-10       Impact factor: 4.272

9.  Heme levels switch the function of Hap1 of Saccharomyces cerevisiae between transcriptional activator and transcriptional repressor.

Authors:  Mark J Hickman; Fred Winston
Journal:  Mol Cell Biol       Date:  2007-09-04       Impact factor: 4.272

10.  Plc1p is required for SAGA recruitment and derepression of Sko1p-regulated genes.

Authors:  Nilanjan Guha; Parima Desai; Ales Vancura
Journal:  Mol Biol Cell       Date:  2007-04-11       Impact factor: 4.138

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