Literature DB >> 21104417

Pleiotropic corepressors Sin3 and Ssn6 interact with repressor Opi1 and negatively regulate transcription of genes required for phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.

Yvonne Jäschke1, Juliane Schwarz, Diana Clausnitzer, Carina Müller, Hans-Joachim Schüller.   

Abstract

Repressor protein Opi1 is required to negatively regulate yeast structural genes of phospholipid biosynthesis in the presence of precursor molecules inositol and choline (IC). Opi1 interacts with the paired amphipathic helix 1 (PAH1) of pleiotropic corepressor Sin3, leading to recruitment of histone deacetylases (HDACs). Mutational analysis of the Opi1-Sin3 interaction domain (OSID) revealed that hydrophobic OSID residues L56, V59 and V67 of Opi1 are indispensable for gene repression. Our results also suggested that repression is not executed entirely via Sin3. Indeed, we could show that OSID contacts a second pleiotropic corepressor, Ssn6 (=Cyc8), which together with Tup1 is also able to recruit HDACs. Interestingly, mutations sin3 and ssn6 turned out as synthetically lethal. Our analysis further revealed that OSID not only binds to PAH1 but also interacts with tetratricopeptide repeats (TPR) of Ssn6. This interaction could no longer be observed with Opi1 OSID variants. To trigger gene repression, Opi1 must also interact with activator Ino2, using its activator interaction domain (AID). AID contains a hydrophobic structural motif reminiscent of a leucine zipper. Our mutational analysis of selected positions indeed confirmed that residues L333, L340, V343, V350, L354 and V361 are necessary for repression of Opi1 target genes.

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Year:  2010        PMID: 21104417     DOI: 10.1007/s00438-010-0589-5

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  62 in total

1.  Ssn6-Tup1 interacts with class I histone deacetylases required for repression.

Authors:  A D Watson; D G Edmondson; J R Bone; Y Mukai; Y Yu; W Du; D J Stillman; S Y Roth
Journal:  Genes Dev       Date:  2000-11-01       Impact factor: 11.361

2.  Analysis of Opi1p repressor mutants.

Authors:  Mohan R Kaadige; John M Lopes
Journal:  Curr Genet       Date:  2005-12-02       Impact factor: 3.886

Review 3.  Transcriptional regulation of yeast phospholipid biosynthetic genes.

Authors:  Meng Chen; Leandria C Hancock; John M Lopes
Journal:  Biochim Biophys Acta       Date:  2006-06-06

4.  Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription.

Authors:  Michael J Carrozza; Bing Li; Laurence Florens; Tamaki Suganuma; Selene K Swanson; Kenneth K Lee; Wei-Jong Shia; Scott Anderson; John Yates; Michael P Washburn; Jerry L Workman
Journal:  Cell       Date:  2005-11-18       Impact factor: 41.582

5.  Sfl1 functions via the co-repressor Ssn6-Tup1 and the cAMP-dependent protein kinase Tpk2.

Authors:  R S Conlan; D Tzamarias
Journal:  J Mol Biol       Date:  2001-06-22       Impact factor: 5.469

6.  The negative regulator Opi1 of phospholipid biosynthesis in yeast contacts the pleiotropic repressor Sin3 and the transcriptional activator Ino2.

Authors:  C Wagner; M Dietz; J Wittmann; A Albrecht; H J Schüller
Journal:  Mol Microbiol       Date:  2001-07       Impact factor: 3.501

7.  Promoter-dependent roles for the Srb10 cyclin-dependent kinase and the Hda1 deacetylase in Tup1-mediated repression in Saccharomyces cerevisiae.

Authors:  Sarah R Green; Alexander D Johnson
Journal:  Mol Biol Cell       Date:  2004-07-07       Impact factor: 4.138

8.  RPD1 (SIN3/UME4) is required for maximal activation and repression of diverse yeast genes.

Authors:  M Vidal; R Strich; R E Esposito; R F Gaber
Journal:  Mol Cell Biol       Date:  1991-12       Impact factor: 4.272

Review 9.  Sin3: master scaffold and transcriptional corepressor.

Authors:  Adrienne Grzenda; Gwen Lomberk; Jin-San Zhang; Raul Urrutia
Journal:  Biochim Biophys Acta       Date:  2009-06-06

10.  Global landscape of protein complexes in the yeast Saccharomyces cerevisiae.

Authors:  Nevan J Krogan; Gerard Cagney; Haiyuan Yu; Gouqing Zhong; Xinghua Guo; Alexandr Ignatchenko; Joyce Li; Shuye Pu; Nira Datta; Aaron P Tikuisis; Thanuja Punna; José M Peregrín-Alvarez; Michael Shales; Xin Zhang; Michael Davey; Mark D Robinson; Alberto Paccanaro; James E Bray; Anthony Sheung; Bryan Beattie; Dawn P Richards; Veronica Canadien; Atanas Lalev; Frank Mena; Peter Wong; Andrei Starostine; Myra M Canete; James Vlasblom; Samuel Wu; Chris Orsi; Sean R Collins; Shamanta Chandran; Robin Haw; Jennifer J Rilstone; Kiran Gandi; Natalie J Thompson; Gabe Musso; Peter St Onge; Shaun Ghanny; Mandy H Y Lam; Gareth Butland; Amin M Altaf-Ul; Shigehiko Kanaya; Ali Shilatifard; Erin O'Shea; Jonathan S Weissman; C James Ingles; Timothy R Hughes; John Parkinson; Mark Gerstein; Shoshana J Wodak; Andrew Emili; Jack F Greenblatt
Journal:  Nature       Date:  2006-03-22       Impact factor: 49.962

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  7 in total

Review 1.  The response to inositol: regulation of glycerolipid metabolism and stress response signaling in yeast.

Authors:  Susan A Henry; Maria L Gaspar; Stephen A Jesch
Journal:  Chem Phys Lipids       Date:  2014-01-10       Impact factor: 3.329

2.  Multiple histone deacetylases are recruited by corepressor Sin3 and contribute to gene repression mediated by Opi1 regulator of phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.

Authors:  Mathias Grigat; Yvonne Jäschke; Felix Kliewe; Matthias Pfeifer; Susanne Walz; Hans-Joachim Schüller
Journal:  Mol Genet Genomics       Date:  2012-04-28       Impact factor: 3.291

3.  Promoter recruitment of corepressors Sin3 and Cyc8 by activator proteins of the yeast Saccharomyces cerevisiae.

Authors:  Felix Kliewe; Maike Engelhardt; Rasha Aref; Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2017-02-07       Impact factor: 3.886

4.  Forkhead transcription factor Fkh1: insights into functional regulatory domains crucial for recruitment of Sin3 histone deacetylase complex.

Authors:  Rasha Aref; Marwa N M E Sanad; Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2021-02-26       Impact factor: 3.886

Review 5.  Metabolism and regulation of glycerolipids in the yeast Saccharomyces cerevisiae.

Authors:  Susan A Henry; Sepp D Kohlwein; George M Carman
Journal:  Genetics       Date:  2012-02       Impact factor: 4.562

6.  Transcriptional repressor Gal80 recruits corepressor complex Cyc8-Tup1 to structural genes of the Saccharomyces cerevisiae GAL regulon.

Authors:  Julia Lettow; Rasha Aref; Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2021-10-07       Impact factor: 3.886

7.  Functional analysis of Cti6 core domain responsible for recruitment of epigenetic regulators Sin3, Cyc8 and Tup1.

Authors:  Rasha Aref; Hans-Joachim Schüller
Journal:  Curr Genet       Date:  2020-09-26       Impact factor: 3.886

  7 in total

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