Literature DB >> 14729346

Rapid collapse precedes the fast two-state folding of the cold shock protein.

Christine Magg1, Franz X Schmid.   

Abstract

The cold shock protein Bc-Csp folds very rapidly in a reaction that is well described by a kinetic two-state mechanism without intermediates. We measured the shortening of six intra-protein distances during folding by Förster resonance energy transfer (FRET) in combination with stopped-flow experiments. Single tryptophan residues were engineered into the protein as the donors, and single 5-(((acetylamino)ethyl)amino)naphthalene-1-sulfonate (AEDANS) residues were placed as the acceptors at solvent-exposed sites of Bc-Csp. Their R0 value of about 22 A was well suited for following distance changes during the folding of this protein with a high sensitivity. The mutagenesis and the labeling did not alter the refolding kinetics. The changes in energy transfer during folding were monitored by both donor and acceptor emission and reciprocal effects were found. In two cases the donor-acceptor distances were similar in the unfolded and the folded state and, as a consequence, the kinetic changes in energy transfer upon folding were very small. For four donor/acceptor pairs we found that > or =50% of the increase in energy transfer upon folding occurred prior to the rate-limiting step of folding. This reveals that about half of the shortening of the intra-molecular distances upon folding has occurred already before the rate-limiting step and suggests that the fast two-state folding reaction of Bc-Csp is preceded by a very rapid collapse.

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Year:  2004        PMID: 14729346     DOI: 10.1016/j.jmb.2003.11.050

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  20 in total

1.  From the Cover: Charge interactions can dominate the dimensions of intrinsically disordered proteins.

Authors:  Sonja Müller-Späth; Andrea Soranno; Verena Hirschfeld; Hagen Hofmann; Stefan Rüegger; Luc Reymond; Daniel Nettels; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-16       Impact factor: 11.205

2.  Femtomole mixer for microsecond kinetic studies of protein folding.

Authors:  David E Hertzog; Xavier Michalet; Marcus Jäger; Xiangxu Kong; Juan G Santiago; Shimon Weiss; Olgica Bakajin
Journal:  Anal Chem       Date:  2004-12-15       Impact factor: 6.986

3.  Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations.

Authors:  Kusai A Merchant; Robert B Best; John M Louis; Irina V Gopich; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-24       Impact factor: 11.205

4.  Ultrafast dynamics of protein collapse from single-molecule photon statistics.

Authors:  Daniel Nettels; Irina V Gopich; Armin Hoffmann; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-14       Impact factor: 11.205

5.  Direct observation of active protein folding using lock-in force spectroscopy.

Authors:  Michael Schlierf; Felix Berkemeier; Matthias Rief
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

Review 6.  Kinetic barriers and the role of topology in protein and RNA folding.

Authors:  Tobin R Sosnick
Journal:  Protein Sci       Date:  2008-05-23       Impact factor: 6.725

7.  Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins.

Authors:  Daniel Nettels; Sonja Müller-Späth; Frank Küster; Hagen Hofmann; Dominik Haenni; Stefan Rüegger; Luc Reymond; Armin Hoffmann; Jan Kubelka; Benjamin Heinz; Klaus Gast; Robert B Best; Benjamin Schuler
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-20       Impact factor: 11.205

8.  Excluded volume, local structural cooperativity, and the polymer physics of protein folding rates.

Authors:  Xianghong Qi; John J Portman
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-14       Impact factor: 11.205

9.  Is there an en route folding intermediate for Cold shock proteins?

Authors:  Lei Huang; Eugene I Shakhnovich
Journal:  Protein Sci       Date:  2012-03-29       Impact factor: 6.725

10.  Single-molecule studies of the Im7 folding landscape.

Authors:  Sara D Pugh; Christopher Gell; D Alastair Smith; Sheena E Radford; David J Brockwell
Journal:  J Mol Biol       Date:  2010-03-06       Impact factor: 5.469

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