Literature DB >> 14709075

Dynamics of protein and peptide hydration.

Kristofer Modig1, Edvards Liepinsh, Gottfried Otting, Bertil Halle.   

Abstract

Biological processes often involve the surfaces of proteins, where the structural and dynamic properties of the aqueous solvent are modified. Information about the dynamics of protein hydration can be obtained by measuring the magnetic relaxation dispersion (MRD) of the water (2)H and (17)O nuclei or by recording the nuclear Overhauser effect (NOE) between water and protein protons. Here, we use the MRD method to study the hydration of the cyclic peptide oxytocin and the globular protein BPTI in deeply supercooled solutions. The results provide a detailed characterization of water dynamics in the hydration layer at the surface of these biomolecules. More than 95% of the water molecules in contact with the biomolecular surface are found to be no more than two-fold motionally retarded as compared to bulk water. In contrast to small nonpolar molecules, the retardation factor for BPTI showed little or no temperature dependence, suggesting that the exposed nonpolar residues do not induce clathrate-like hydrophobic hydration structures. New NOE data for oxytocin and published NOE data for BPTI were analyzed, and a mutually consistent interpretation of MRD and NOE results was achieved with the aid of a new theory of intermolecular dipolar relaxation that accounts explicitly for the dynamic perturbation at the biomolecular surface. The analysis indicates that water-protein NOEs are dominated by long-range dipolar couplings to bulk water, unless the monitored protein proton is near a partly or fully buried hydration site where the water molecule has a long residence time.

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Year:  2004        PMID: 14709075     DOI: 10.1021/ja038325d

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  43 in total

Review 1.  Protein hydration dynamics in solution: a critical survey.

Authors:  Bertil Halle
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

2.  Biomolecular cryocrystallography: structural changes during flash-cooling.

Authors:  Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-29       Impact factor: 11.205

3.  Crowding induces differences in the diffusion of thermophilic and mesophilic proteins: a new look at neutron scattering results.

Authors:  Enrique Marcos; Pau Mestres; Ramon Crehuet
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

4.  Probing water-protein contacts in a MMP-12/CGS27023A complex by nuclear magnetic resonance spectroscopy.

Authors:  Helena Kovacs; Tatiana Agback; Johan Isaksson
Journal:  J Biomol NMR       Date:  2012-04-15       Impact factor: 2.835

5.  The polyproline II conformation in short alanine peptides is noncooperative.

Authors:  Kang Chen; Zhigang Liu; Neville R Kallenbach
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-15       Impact factor: 11.205

6.  The nonequilibrium phase and glass transition behavior of beta-lactoglobulin.

Authors:  Roger Parker; Timothy R Noel; Geoffrey J Brownsey; Katrin Laos; Stephen G Ring
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

Review 7.  Protein-solvent interactions.

Authors:  Ninad Prabhu; Kim Sharp
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

8.  Penetration of lipid chains into transmembrane surfaces of membrane proteins: studies with MscL.

Authors:  Joanne Carney; J Malcolm East; Anthony G Lee
Journal:  Biophys J       Date:  2007-02-16       Impact factor: 4.033

9.  Minimalist explicit solvation models for surface loops in proteins.

Authors:  Ronald P White; Hagai Meirovitch
Journal:  J Chem Theory Comput       Date:  2006       Impact factor: 6.006

10.  A peptide's perspective of water dynamics.

Authors:  Ayanjeet Ghosh; Robin M Hochstrasser
Journal:  Chem Phys       Date:  2011-08-11       Impact factor: 2.348

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