Literature DB >> 14695285

Increasing the amphiphilicity of an amyloidogenic peptide changes the beta-sheet structure in the fibrils from antiparallel to parallel.

David J Gordon1, John J Balbach, Robert Tycko, Stephen C Meredith.   

Abstract

Solid-state NMR measurements have been reported for four peptides derived from beta-amyloid peptide Abeta(1-42): Abeta(1-40), Abeta(10-35), Abeta(16-22), and Abeta(34-42). Of these, the first two are predicted to be amphiphilic and were reported to form parallel beta-sheets, whereas the latter two peptides appear nonamphiphilic and adopt an antiparallel beta-sheet organization. These results suggest that amphiphilicity may be significant in determining fibril structure. Here, we demonstrate that acylation of Abeta(16-22) with octanoic acid increases its amphiphilicity and changes the organization of fibrillar beta-sheet from antiparallel to parallel. Electron microscopy, Congo Red binding, and one-dimensional 13C NMR measurements demonstrate that octanoyl-Abeta(16-22) forms typical amyloid fibrils. Based on the stability of monolayers at the air-water interface, octanoyl-Abeta(16-22) is more amphiphilic than Abeta(16-22). Measurements of 13C-13C and 15N-13C nuclear magnetic dipole-dipole couplings in isotopically labeled fibril samples, using the constant-time finite-pulse radiofrequency-driven recoupling (fpRFDR-CT) and rotational echo double resonance (REDOR) solid-state NMR techniques, demonstrate that octanoyl-Abeta(16-22) fibrils are composed of parallel beta-sheets, whereas Abeta(16-22) fibrils are composed of antiparallel beta-sheets. These data demonstrate that amphiphilicity is critical in determining the structural organization of beta-sheets in the amyloid fibril. This work also shows that all amyloid fibrils do not share a common supramolecular structure, and suggests a method for controlling the structure of amyloid fibrils.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 14695285      PMCID: PMC1303808          DOI: 10.1016/S0006-3495(04)74119-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  27 in total

1.  Two-dimensional structure of beta-amyloid(10-35) fibrils.

Authors:  T L Benzinger; D M Gregory; T S Burkoth; H Miller-Auer; D G Lynn; R E Botto; S C Meredith
Journal:  Biochemistry       Date:  2000-03-28       Impact factor: 3.162

2.  Optimization of hydrophobic domains in peptides that undergo transformation from alpha-helix to beta-fibril.

Authors:  Y Takahashi; A Ueno; H Mihara
Journal:  Bioorg Med Chem       Date:  1999-01       Impact factor: 3.641

3.  Properties of human apolipoprotein A-I at the air-water interface.

Authors:  B W Shen; A M Scanu
Journal:  Biochemistry       Date:  1980-08-05       Impact factor: 3.162

4.  Photoaffinity cross-linking of Alzheimer's disease amyloid fibrils reveals interstrand contact regions between assembled beta-amyloid peptide subunits.

Authors:  G F Egnaczyk; K D Greis; E R Stimson; J E Maggio
Journal:  Biochemistry       Date:  2001-10-02       Impact factor: 3.162

5.  A mathematical model of the kinetics of beta-amyloid fibril growth from the denatured state.

Authors:  M M Pallitto; R M Murphy
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

6.  Sensitivity enhancement in structural measurements by solid state NMR through pulsed spin locking.

Authors:  Aneta T Petkova; Robert Tycko
Journal:  J Magn Reson       Date:  2002-04       Impact factor: 2.229

7.  Amyloid fibril formation by A beta 16-22, a seven-residue fragment of the Alzheimer's beta-amyloid peptide, and structural characterization by solid state NMR.

Authors:  J J Balbach; Y Ishii; O N Antzutkin; R D Leapman; N W Rizzo; F Dyda; J Reed; R Tycko
Journal:  Biochemistry       Date:  2000-11-14       Impact factor: 3.162

8.  Multiple quantum solid-state NMR indicates a parallel, not antiparallel, organization of beta-sheets in Alzheimer's beta-amyloid fibrils.

Authors:  O N Antzutkin; J J Balbach; R D Leapman; N W Rizzo; J Reed; R Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

9.  Supramolecular structure in full-length Alzheimer's beta-amyloid fibrils: evidence for a parallel beta-sheet organization from solid-state nuclear magnetic resonance.

Authors:  John J Balbach; Aneta T Petkova; Nathan A Oyler; Oleg N Antzutkin; David J Gordon; Stephen C Meredith; Robert Tycko
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

10.  Structural and dynamic features of Alzheimer's Abeta peptide in amyloid fibrils studied by site-directed spin labeling.

Authors:  Marianna Török; Saskia Milton; Rakez Kayed; Peng Wu; Theresa McIntire; Charles G Glabe; Ralf Langen
Journal:  J Biol Chem       Date:  2002-08-13       Impact factor: 5.157

View more
  28 in total

1.  Oligomerization of amyloid Abeta16-22 peptides using hydrogen bonds and hydrophobicity forces.

Authors:  Giorgio Favrin; Anders Irbäck; Sandipan Mohanty
Journal:  Biophys J       Date:  2004-09-17       Impact factor: 4.033

Review 2.  Unzipping the mysteries of amyloid fiber formation.

Authors:  Andrew D Miranker
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-22       Impact factor: 11.205

3.  Free energy landscapes for amyloidogenic tetrapeptides dimerization.

Authors:  A Baumketner; J-E Shea
Journal:  Biophys J       Date:  2005-09       Impact factor: 4.033

4.  Polymorphic fibril formation by residues 10-40 of the Alzheimer's beta-amyloid peptide.

Authors:  Anant K Paravastu; Aneta T Petkova; Robert Tycko
Journal:  Biophys J       Date:  2006-03-24       Impact factor: 4.033

5.  Characterization of amyloid structures at the molecular level by solid state nuclear magnetic resonance spectroscopy.

Authors:  Robert Tycko
Journal:  Methods Enzymol       Date:  2006       Impact factor: 1.600

6.  Molecular alignment within beta-sheets in Abeta(14-23) fibrils: solid-state NMR experiments and theoretical predictions.

Authors:  Zimei Bu; Yuan Shi; David J E Callaway; Robert Tycko
Journal:  Biophys J       Date:  2006-10-20       Impact factor: 4.033

Review 7.  Amyloid-a state in many guises: survival of the fittest fibril fold.

Authors:  Jesper S Pedersen; Daniel E Otzen
Journal:  Protein Sci       Date:  2007-11-27       Impact factor: 6.725

8.  Near infrared dyes as lifetime solvatochromic probes for micropolarity measurements of biological systems.

Authors:  Mikhail Y Berezin; Hyeran Lee; Walter Akers; Samuel Achilefu
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

Review 9.  Solid-state NMR as a probe of amyloid structure.

Authors:  Robert Tycko
Journal:  Protein Pept Lett       Date:  2006       Impact factor: 1.890

10.  Parallel beta-sheets and polar zippers in amyloid fibrils formed by residues 10-39 of the yeast prion protein Ure2p.

Authors:  Jerry C C Chan; Nathan A Oyler; Wai-Ming Yau; Robert Tycko
Journal:  Biochemistry       Date:  2005-08-09       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.