Literature DB >> 17046393

Characterization of amyloid structures at the molecular level by solid state nuclear magnetic resonance spectroscopy.

Robert Tycko1.   

Abstract

Solid state nuclear magnetic resonance (NMR) spectroscopy is particularly useful in structural studies of amyloid fibrils because solid state NMR techniques have unique capabilities as site-specific, molecular-level structural probes of noncrystalline materials. These techniques provide experimental data that strongly constrain the secondary, tertiary, and quaternary structures of amyloid fibrils, permitting the development of experimentally based structural models. Examples of techniques that are applicable to amyloid samples prepared with isotopic labeling of specific sites and to samples prepared with uniform isotopic labeling of selected residues are presented, illustrating the utility of the various techniques and labeling schemes. Information regarding the preparation of amyloid samples for solid state NMR measurements is also included.

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Year:  2006        PMID: 17046393      PMCID: PMC1633711          DOI: 10.1016/S0076-6879(06)13006-2

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  52 in total

Review 1.  Progress towards a molecular-level structural understanding of amyloid fibrils.

Authors:  Robert Tycko
Journal:  Curr Opin Struct Biol       Date:  2004-02       Impact factor: 6.809

2.  Solid-state NMR studies of the prion protein H1 fragment.

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Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

3.  NH-NH vector correlation in peptides by solid-state NMR.

Authors:  B Reif; M Hohwy; C P Jaroniec; C M Rienstra; R G Griffin
Journal:  J Magn Reson       Date:  2000-07       Impact factor: 2.229

4.  Structural model for the beta-amyloid fibril based on interstrand alignment of an antiparallel-sheet comprising a C-terminal peptide.

Authors:  P T Lansbury; P R Costa; J M Griffiths; E J Simon; M Auger; K J Halverson; D A Kocisko; Z S Hendsch; T T Ashburn; R G Spencer
Journal:  Nat Struct Biol       Date:  1995-11

5.  Determination of internuclear distances and the orientation of functional groups by solid-state NMR: rotational resonance study of the conformation of retinal in bacteriorhodopsin.

Authors:  A E McDermott; F Creuzet; R Gebhard; K van der Hoef; M H Levitt; J Herzfeld; J Lugtenburg; R G Griffin
Journal:  Biochemistry       Date:  1994-05-24       Impact factor: 3.162

6.  One- and two-dimensional 13C-1H/15N- 1H dipolar correlation experiments under fast magic-angle spinning for determining the peptide dihedral angle phi.

Authors:  K Takegoshi; T Imaizumi; T Terao
Journal:  Solid State Nucl Magn Reson       Date:  2000-07       Impact factor: 2.293

7.  Studies on the in vitro assembly of a beta 1-40: implications for the search for a beta fibril formation inhibitors.

Authors:  C S Goldsbury; S Wirtz; S A Müller; S Sunderji; P Wicki; U Aebi; P Frey
Journal:  J Struct Biol       Date:  2000-06       Impact factor: 2.867

8.  Glutamine repeats as polar zippers: their possible role in inherited neurodegenerative diseases.

Authors:  M F Perutz; T Johnson; M Suzuki; J T Finch
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

9.  Molecular modeling of the core of Abeta amyloid fibrils.

Authors:  Jun-tao Guo; Ronald Wetzel; Ying Xu
Journal:  Proteins       Date:  2004-11-01

10.  Relationship between nuclear magnetic resonance chemical shift and protein secondary structure.

Authors:  D S Wishart; B D Sykes; F M Richards
Journal:  J Mol Biol       Date:  1991-11-20       Impact factor: 5.469

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  11 in total

Review 1.  Chemical shift tensor - the heart of NMR: Insights into biological aspects of proteins.

Authors:  Hazime Saitô; Isao Ando; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05-07       Impact factor: 9.795

2.  Detection and analysis of protein aggregation with confocal single molecule fluorescence spectroscopy.

Authors:  Frank Hillger; Daniel Nettels; Simone Dorsch; Benjamin Schuler
Journal:  J Fluoresc       Date:  2007-04-20       Impact factor: 2.217

Review 3.  Amyloid beta-protein assembly and Alzheimer disease.

Authors:  Robin Roychaudhuri; Mingfeng Yang; Minako M Hoshi; David B Teplow
Journal:  J Biol Chem       Date:  2008-10-09       Impact factor: 5.157

Review 4.  Solid-state NMR studies of amyloid fibril structure.

Authors:  Robert Tycko
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

5.  Influence of Nanoparticle Size and Shape on Oligomer Formation of an Amyloidogenic Peptide.

Authors:  Edward P O'Brien; John E Straub; Bernard R Brooks; D Thirumalai
Journal:  J Phys Chem Lett       Date:  2011-05-19       Impact factor: 6.475

6.  Role of aggregation conditions in structure, stability, and toxicity of intermediates in the Abeta fibril formation pathway.

Authors:  Sungmun Lee; Erik J Fernandez; Theresa A Good
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

7.  Evidence for novel beta-sheet structures in Iowa mutant beta-amyloid fibrils.

Authors:  Robert Tycko; Kimberly L Sciarretta; Joseph P R O Orgel; Stephen C Meredith
Journal:  Biochemistry       Date:  2009-07-07       Impact factor: 3.162

Review 8.  Prion protein misfolding and disease.

Authors:  Roger A Moore; Lara M Taubner; Suzette A Priola
Journal:  Curr Opin Struct Biol       Date:  2009-01-20       Impact factor: 6.809

9.  Computational selection of inhibitors of Abeta aggregation and neuronal toxicity.

Authors:  Deliang Chen; Zane S Martin; Claudio Soto; Catherine H Schein
Journal:  Bioorg Med Chem       Date:  2009-05-27       Impact factor: 3.641

Review 10.  Utilizing magnetic resonance techniques to study membrane interactions of amyloid peptides.

Authors:  Sunnia Rajput; Marc-Antoine Sani; David W Keizer; Frances Separovic
Journal:  Biochem Soc Trans       Date:  2021-06-30       Impact factor: 5.407

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