Literature DB >> 14695245

Self-organization of polarized cell signaling via autocrine circuits: computational model analysis.

Ivan V Maly1, H Steven Wiley, Douglas A Lauffenburger.   

Abstract

Recent studies have suggested that autocrine signaling through epidermal growth factor receptor (EGFR) might be involved in generating or maintaining an intrinsic polarity in tissue cells, possibly via spatial localization of EGFR-mediated signaling. The difficulty of experimental investigation of autocrine signaling makes especially valuable an application of computational modeling for critical hypotheses about the dynamic operation of the underlying signaling circuits, both intracellular and extracellular. Toward this end, we develop and analyze here a spatially distributed dynamic computational model of autocrine EGFR signaling. Under certain conditions, the model spontaneously evolves into a state wherein sustained signaling is spatially localized on smaller than cell dimension, conferring a polarity to the otherwise nonpolar model cell. Conditions of a sufficiently large rate of autocrine EGFR ligand release and of a sufficiently small exogenous ligand concentration are qualitatively consistent with experimental observations of EGFR-mediated migration. Thus, computational analysis supports the concept that autocrine EGFR signaling circuits could play a role in helping generate and/or maintain an intrinsic cell spatial polarity, possibly related to migration as well as tissue organization. We additionally offer particular suggestions for critical nodes in the EGFR signaling circuits governing this self-organization capability.

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Year:  2004        PMID: 14695245      PMCID: PMC1303773          DOI: 10.1016/s0006-3495(04)74079-5

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  47 in total

1.  Spatial gradients of cellular phospho-proteins.

Authors:  G C Brown; B N Kholodenko
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Journal:  Eur J Biochem       Date:  2000-03

Review 3.  Cell signaling by receptor tyrosine kinases.

Authors:  J Schlessinger
Journal:  Cell       Date:  2000-10-13       Impact factor: 41.582

Review 4.  Computational modeling of the EGF-receptor system: a paradigm for systems biology.

Authors:  H Steven Wiley; Stanislav Y Shvartsman; Douglas A Lauffenburger
Journal:  Trends Cell Biol       Date:  2003-01       Impact factor: 20.808

5.  Autocrine regulation of membrane transforming growth factor-alpha cleavage.

Authors:  J Baselga; J Mendelsohn; Y M Kim; A Pandiella
Journal:  J Biol Chem       Date:  1996-02-09       Impact factor: 5.157

6.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

7.  Negative feedback regulation and desensitization of insulin- and epidermal growth factor-stimulated p21ras activation.

Authors:  W J Langlois; T Sasaoka; A R Saltiel; J M Olefsky
Journal:  J Biol Chem       Date:  1995-10-27       Impact factor: 5.157

8.  Quantitative analysis of the EGF receptor autocrine system reveals cryptic regulation of cell response by ligand capture.

Authors:  A E DeWitt; J Y Dong; H S Wiley; D A Lauffenburger
Journal:  J Cell Sci       Date:  2001-06       Impact factor: 5.285

9.  A stochastic model for leukocyte random motility and chemotaxis based on receptor binding fluctuations.

Authors:  R T Tranquillo; D A Lauffenburger; S H Zigmond
Journal:  J Cell Biol       Date:  1988-02       Impact factor: 10.539

10.  Local signaling by the EGF receptor.

Authors:  Stephan J Kempiak; Shu-Chin Yip; Jonathan M Backer; Jeffrey E Segall
Journal:  J Cell Biol       Date:  2003-09-01       Impact factor: 10.539

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  15 in total

1.  Mathematical analysis of steady-state solutions in compartment and continuum models of cell polarization.

Authors:  Zhenzhen Zheng; Ching-Shan Chou; Tau-Mu Yi; Qing Nie
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Review 2.  Computational modelling of the receptor-tyrosine-kinase-activated MAPK pathway.

Authors:  Richard J Orton; Oliver E Sturm; Vladislav Vyshemirsky; Muffy Calder; David R Gilbert; Walter Kolch
Journal:  Biochem J       Date:  2005-12-01       Impact factor: 3.857

Review 3.  Cell-signalling dynamics in time and space.

Authors:  Boris N Kholodenko
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4.  Wave-pinning and cell polarity from a bistable reaction-diffusion system.

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Journal:  Biophys J       Date:  2008-01-22       Impact factor: 4.033

5.  Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm.

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Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

6.  Cholesterol dictates the freedom of EGF receptors and HER2 in the plane of the membrane.

Authors:  Galya Orr; Dehong Hu; Serdar Ozçelik; Lee K Opresko; H Steven Wiley; Steven D Colson
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Review 7.  Mathematical modeling of eukaryotic cell migration: insights beyond experiments.

Authors:  Gaudenz Danuser; Jun Allard; Alex Mogilner
Journal:  Annu Rev Cell Dev Biol       Date:  2013-07-24       Impact factor: 13.827

8.  Phosphoinositides and Rho proteins spatially regulate actin polymerization to initiate and maintain directed movement in a one-dimensional model of a motile cell.

Authors:  Adriana T Dawes; Leah Edelstein-Keshet
Journal:  Biophys J       Date:  2006-11-10       Impact factor: 4.033

9.  Multiple-state reactions between the epidermal growth factor receptor and Grb2 as observed by using single-molecule analysis.

Authors:  Miki Morimatsu; Hiroaki Takagi; Kosuke G Ota; Ryo Iwamoto; Toshio Yanagida; Yasushi Sako
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-08       Impact factor: 11.205

10.  Theoretical method for evaluation of therapeutic effects and adverse effects of epidermal growth factor receptor tyrosine kinase inhibitors in clinical treatment.

Authors:  Koji Kimura; Risa Takayanagi; Tomoki Fukushima; Yasuhiko Yamada
Journal:  Med Oncol       Date:  2017-09-08       Impact factor: 3.064

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