Literature DB >> 14688270

X-ray structure of translation initiation factor eIF2gamma: implications for tRNA and eIF2alpha binding.

Antonina Roll-Mecak1, Pankaj Alone, Chune Cao, Thomas E Dever, Stephen K Burley.   

Abstract

The x-ray structure of the gamma-subunit of the heterotrimeric translation initiation factor eIF2 has been determined to 2.4-A resolution. eIF2 is a GTPase that delivers the initiator Met-tRNA to the P site on the small ribosomal subunit during a rate-limiting initiation step in translation. The structure of eIF2gamma closely resembles that of EF1A.GTP, consisting of an N-terminal G domain followed by two beta-barrels arranged in a closed configuration with domain II packed against the G domain in the vicinity of the Switch regions. The G domain of eIF2gamma has an unusual zinc ribbon motif, not previously found in other GTPases. Structure-based site-directed mutagenesis was used to identify two adjacent features on the surface of eIF2gamma that bind the alpha-subunit and Met-tRNA(i)(Met), respectively. These structural, biochemical, and genetic results provide new insights into eIF2 ternary complex assembly.

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Year:  2003        PMID: 14688270     DOI: 10.1074/jbc.M310418200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  27 in total

1.  Structure of the ternary initiation complex aIF2-GDPNP-methionylated initiator tRNA.

Authors:  Emmanuelle Schmitt; Michel Panvert; Christine Lazennec-Schurdevin; Pierre-Damien Coureux; Javier Perez; Andrew Thompson; Yves Mechulam
Journal:  Nat Struct Mol Biol       Date:  2012-03-25       Impact factor: 15.369

Review 2.  Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Authors:  Jon R Lorsch; Thomas E Dever
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

3.  Selenocysteine tRNA-specific elongation factor SelB is a structural chimaera of elongation and initiation factors.

Authors:  Marc Leibundgut; Christian Frick; Martin Thanbichler; August Böck; Nenad Ban
Journal:  EMBO J       Date:  2004-12-23       Impact factor: 11.598

4.  Structure of archaeal translational initiation factor 2 betagamma-GDP reveals significant conformational change of the beta-subunit and switch 1 region.

Authors:  Masaaki Sokabe; Min Yao; Naoki Sakai; Shingo Toya; Isao Tanaka
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-21       Impact factor: 11.205

5.  An eIF5/eIF2 complex antagonizes guanine nucleotide exchange by eIF2B during translation initiation.

Authors:  Chingakham Ranjit Singh; Bumjun Lee; Tsuyoshi Udagawa; Sarah S Mohammad-Qureshi; Yasufumi Yamamoto; Graham D Pavitt; Katsura Asano
Journal:  EMBO J       Date:  2006-09-21       Impact factor: 11.598

6.  Structure of an archaeal heterotrimeric initiation factor 2 reveals a nucleotide state between the GTP and the GDP states.

Authors:  Laure Yatime; Yves Mechulam; Sylvain Blanquet; Emmanuelle Schmitt
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-13       Impact factor: 11.205

7.  The Jigsaw Puzzle of mRNA Translation Initiation in Eukaryotes: A Decade of Structures Unraveling the Mechanics of the Process.

Authors:  Yaser Hashem; Joachim Frank
Journal:  Annu Rev Biophys       Date:  2018-03-01       Impact factor: 12.981

8.  Phosphorylation of human eukaryotic initiation factor 2γ: novel site identification and targeted PKC involvement.

Authors:  Armann Andaya; Weitao Jia; Masaaki Sokabe; Christopher S Fraser; John W B Hershey; Julie A Leary
Journal:  J Proteome Res       Date:  2011-09-12       Impact factor: 4.466

9.  Molecular Determinants of the Regulation of Development and Metabolism by Neuronal eIF2α Phosphorylation in Caenorhabditis elegans.

Authors:  Warakorn Kulalert; Harini Sadeeshkumar; Ying K Zhang; Frank C Schroeder; Dennis H Kim
Journal:  Genetics       Date:  2017-03-14       Impact factor: 4.562

10.  Translation initiation factor 2gamma mutant alters start codon selection independent of Met-tRNA binding.

Authors:  Pankaj V Alone; Chune Cao; Thomas E Dever
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

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