Literature DB >> 14617804

Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock.

Nicoletta Rizzi1, Marco Denegri, Ilaria Chiodi, Margherita Corioni, Rut Valgardsdottir, Fabio Cobianchi, Silvano Riva, Giuseppe Biamonti.   

Abstract

Heat shock triggers the assembly of nuclear stress bodies that contain heat shock factor 1 and a subset of RNA processing factors. These structures are formed on the pericentromeric heterochromatic regions of specific human chromosomes, among which chromosome 9. In this article we show that these heterochromatic domains are characterized by an epigenetic status typical of euchromatic regions. Similarly to transcriptionally competent portions of the genome, stress bodies are, in fact, enriched in acetylated histone H4. Acetylation peaks at 6 h of recovery from heat shock. Moreover, heterochromatin markers, such as HP1 and histone H3 methylated on lysine 9, are excluded from these nuclear districts. In addition, heat shock triggers the transient accumulation of RNA molecules, heterogeneous in size, containing the subclass of satellite III sequences found in the pericentromeric heterochromatin of chromosome 9. This is the first report of a transcriptional activation of a constitutive heterochromatic portion of the genome in response to stress stimuli.

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Year:  2003        PMID: 14617804      PMCID: PMC329232          DOI: 10.1091/mbc.e03-07-0487

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  28 in total

Review 1.  Heterochromatin.

Authors:  W Hennig
Journal:  Chromosoma       Date:  1999-04       Impact factor: 4.316

2.  Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component.

Authors:  Christèle Maison; Delphine Bailly; Antoine H F M Peters; Jean-Pierre Quivy; Danièle Roche; Angela Taddei; Monika Lachner; Thomas Jenuwein; Geneviève Almouzni
Journal:  Nat Genet       Date:  2002-02-19       Impact factor: 38.330

Review 3.  X-chromosome inactivation: closing in on proteins that bind Xist RNA.

Authors:  Neil Brockdorff
Journal:  Trends Genet       Date:  2002-07       Impact factor: 11.639

4.  Distinctive patterns of histone H4 acetylation are associated with defined sequence elements within both heterochromatic and euchromatic regions of the human genome.

Authors:  C A Johnson; L P O'Neill; A Mitchell; B M Turner
Journal:  Nucleic Acids Res       Date:  1998-02-15       Impact factor: 16.971

5.  Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

Authors:  R E Sobel; R G Cook; C A Perry; A T Annunziato; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

Review 6.  Unravelling heterochromatin: competition between positive and negative factors regulates accessibility.

Authors:  Niall Dillon; Richard Festenstein
Journal:  Trends Genet       Date:  2002-05       Impact factor: 11.639

7.  Coordinated methyl and RNA binding is required for heterochromatin localization of mammalian HP1alpha.

Authors:  Christian Muchardt; Marie Guilleme; Jacob-S Seeler; Didier Trouche; Anne Dejean; Moshe Yaniv
Journal:  EMBO Rep       Date:  2002-09-13       Impact factor: 8.807

8.  Human chromosomes 9, 12, and 15 contain the nucleation sites of stress-induced nuclear bodies.

Authors:  Marco Denegri; Daniela Moralli; Mariano Rocchi; Marco Biggiogera; Elena Raimondi; Fabio Cobianchi; Luigi De Carli; Silvano Riva; Giuseppe Biamonti
Journal:  Mol Biol Cell       Date:  2002-06       Impact factor: 4.138

9.  Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi.

Authors:  Thomas A Volpe; Catherine Kidner; Ira M Hall; Grace Teng; Shiv I S Grewal; Robert A Martienssen
Journal:  Science       Date:  2002-08-22       Impact factor: 47.728

10.  A novel hnRNP protein (HAP/SAF-B) enters a subset of hnRNP complexes and relocates in nuclear granules in response to heat shock.

Authors:  F Weighardt; F Cobianchi; L Cartegni; I Chiodi; A Villa; S Riva; G Biamonti
Journal:  J Cell Sci       Date:  1999-05       Impact factor: 5.285

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  82 in total

1.  Transcription regulates telomere dynamics in human cancer cells.

Authors:  Rajika Arora; Catherine M Brun; Claus M Azzalin
Journal:  RNA       Date:  2012-02-22       Impact factor: 4.942

Review 2.  Pericentric and centromeric transcription: a perfect balance required.

Authors:  Laura E Hall; Sarah E Mitchell; Rachel J O'Neill
Journal:  Chromosome Res       Date:  2012-07       Impact factor: 5.239

3.  Cancer-linked satellite 2 DNA hypomethylation does not regulate Sat2 non-coding RNA expression and is initiated by heat shock pathway activation.

Authors:  Gaëlle Tilman; Nausica Arnoult; Sandrine Lenglez; Amandine Van Beneden; Axelle Loriot; Charles De Smet; Anabelle Decottignies
Journal:  Epigenetics       Date:  2012-06-22       Impact factor: 4.528

Review 4.  Transcription of tandemly repetitive DNA: functional roles.

Authors:  Maria Assunta Biscotti; Adriana Canapa; Mariko Forconi; Ettore Olmo; Marco Barucca
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 5.  Functional elements residing within satellite DNAs.

Authors:  Durdica Ugarkovic
Journal:  EMBO Rep       Date:  2005-11       Impact factor: 8.807

6.  Np95 is implicated in pericentromeric heterochromatin replication and in major satellite silencing.

Authors:  Roberto Papait; Christian Pistore; Diego Negri; Daniela Pecoraro; Lisa Cantarini; Ian Marc Bonapace
Journal:  Mol Biol Cell       Date:  2006-12-20       Impact factor: 4.138

7.  Accumulation of small murine minor satellite transcripts leads to impaired centromeric architecture and function.

Authors:  Haniaa Bouzinba-Segard; Adeline Guais; Claire Francastel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-26       Impact factor: 11.205

8.  Transcriptionally active heterochromatin in rye B chromosomes.

Authors:  Mariana Carchilan; Margarida Delgado; Teresa Ribeiro; Pedro Costa-Nunes; Ana Caperta; Leonor Morais-Cecílio; R Neil Jones; Wanda Viegas; Andreas Houben
Journal:  Plant Cell       Date:  2007-06-22       Impact factor: 11.277

Review 9.  Constitutive heterochromatin: a surprising variety of expressed sequences.

Authors:  Patrizio Dimitri; Ruggiero Caizzi; Ennio Giordano; Maria Carmela Accardo; Giovanna Lattanzi; Giuseppe Biamonti
Journal:  Chromosoma       Date:  2009-05-02       Impact factor: 4.316

10.  Heterotrimerization of heat-shock factors 1 and 2 provides a transcriptional switch in response to distinct stimuli.

Authors:  Anton Sandqvist; Johanna K Björk; Malin Akerfelt; Zhanna Chitikova; Alexei Grichine; Claire Vourc'h; Caroline Jolly; Tiina A Salminen; Yvonne Nymalm; Lea Sistonen
Journal:  Mol Biol Cell       Date:  2009-01-07       Impact factor: 4.138

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