Literature DB >> 19412619

Constitutive heterochromatin: a surprising variety of expressed sequences.

Patrizio Dimitri1, Ruggiero Caizzi, Ennio Giordano, Maria Carmela Accardo, Giovanna Lattanzi, Giuseppe Biamonti.   

Abstract

The organization of chromosomes into euchromatin and heterochromatin is amongst the most important and enigmatic aspects of genome evolution. Constitutive heterochromatin is a basic yet still poorly understood component of eukaryotic chromosomes, and its molecular characterization by means of standard genomic approaches is intrinsically difficult. Although recent evidence indicates that the presence of transcribed genes in constitutive heterochromatin is a conserved trait that accompanies the evolution of eukaryotic genomes, the term heterochromatin is still considered by many as synonymous of gene silencing. In this paper, we comprehensively review data that provide a clearer picture of transcribed sequences within constitutive heterochromatin, with a special emphasis on Drosophila and humans.

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Year:  2009        PMID: 19412619     DOI: 10.1007/s00412-009-0211-y

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  119 in total

1.  LOCALIZATION OF DNA COMPLEMENTARY TO RIBOSOMAL RNA IN THE NUCLEOLUS ORGANIZER REGION OF DROSOPHILA MELANOGASTER.

Authors:  F M RITOSSA; S SPIEGELMAN
Journal:  Proc Natl Acad Sci U S A       Date:  1965-04       Impact factor: 11.205

2.  Identifying a single-copy DNA sequence associated with the expression of a heterochromatic gene, the light locus of Drosophila melanogaster.

Authors:  R H Devlin; D G Holm; K R Morin; B M Honda
Journal:  Genome       Date:  1990-06       Impact factor: 2.166

3.  Mutant nuclear lamin A leads to progressive alterations of epigenetic control in premature aging.

Authors:  Dale K Shumaker; Thomas Dechat; Alexander Kohlmaier; Stephen A Adam; Matthew R Bozovsky; Michael R Erdos; Maria Eriksson; Anne E Goldman; Satya Khuon; Francis S Collins; Thomas Jenuwein; Robert D Goldman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-31       Impact factor: 11.205

4.  Genome-wide HP1 binding in Drosophila: developmental plasticity and genomic targeting signals.

Authors:  Elzo de Wit; Frauke Greil; Bas van Steensel
Journal:  Genome Res       Date:  2005-08-18       Impact factor: 9.043

5.  Suv39h-mediated histone H3 lysine 9 methylation directs DNA methylation to major satellite repeats at pericentric heterochromatin.

Authors:  Bernhard Lehnertz; Yoshihide Ueda; Alwin A H A Derijck; Ulrich Braunschweig; Laura Perez-Burgos; Stefan Kubicek; Taiping Chen; En Li; Thomas Jenuwein; Antoine H F M Peters
Journal:  Curr Biol       Date:  2003-07-15       Impact factor: 10.834

6.  An endogenous small interfering RNA pathway in Drosophila.

Authors:  Benjamin Czech; Colin D Malone; Rui Zhou; Alexander Stark; Catherine Schlingeheyde; Monica Dus; Norbert Perrimon; Manolis Kellis; James A Wohlschlegel; Ravi Sachidanandam; Gregory J Hannon; Julius Brennecke
Journal:  Nature       Date:  2008-05-07       Impact factor: 49.962

7.  Mapping simple repeated DNA sequences in heterochromatin of Drosophila melanogaster.

Authors:  A R Lohe; A J Hilliker; P A Roberts
Journal:  Genetics       Date:  1993-08       Impact factor: 4.562

8.  Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila.

Authors:  Julius Brennecke; Alexei A Aravin; Alexander Stark; Monica Dus; Manolis Kellis; Ravi Sachidanandam; Gregory J Hannon
Journal:  Cell       Date:  2007-03-08       Impact factor: 41.582

9.  NIPBL, encoding a homolog of fungal Scc2-type sister chromatid cohesion proteins and fly Nipped-B, is mutated in Cornelia de Lange syndrome.

Authors:  Emma T Tonkin; Tzu-Jou Wang; Steven Lisgo; Michael J Bamshad; Tom Strachan
Journal:  Nat Genet       Date:  2004-05-16       Impact factor: 38.330

10.  A divergent canonical WNT-signaling pathway regulates microtubule dynamics: dishevelled signals locally to stabilize microtubules.

Authors:  Lorenza Ciani; Olga Krylova; Matthew J Smalley; Trevor C Dale; Patricia C Salinas
Journal:  J Cell Biol       Date:  2004-01-19       Impact factor: 10.539

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  31 in total

1.  Preferential localization of γH2AX foci in euchromatin of retina rod cells after DNA damage induction.

Authors:  Laura Lafon-Hughes; María Vittoria Di Tomaso; Pablo Liddle; Andrea Toledo; Ana Laura Reyes-Ábalos; Gustavo A Folle
Journal:  Chromosome Res       Date:  2013-12-10       Impact factor: 5.239

2.  A Short History and Description of Drosophila melanogaster Classical Genetics: Chromosome Aberrations, Forward Genetic Screens, and the Nature of Mutations.

Authors:  Thomas C Kaufman
Journal:  Genetics       Date:  2017-06       Impact factor: 4.562

3.  A combined banding method that allows the reliable identification of chromosomes as well as differentiation of AT- and GC-rich heterochromatin.

Authors:  Natalya A Lemskaya; Anastasia I Kulemzina; Violetta R Beklemisheva; Larisa S Biltueva; Anastasia A Proskuryakova; John M Hallenbeck; Polina L Perelman; Alexander S Graphodatsky
Journal:  Chromosome Res       Date:  2018-11-15       Impact factor: 5.239

4.  Essential loci in centromeric heterochromatin of Drosophila melanogaster. I: the right arm of chromosome 2.

Authors:  Alistair B Coulthard; Christina Alm; Iulia Cealiac; Don A Sinclair; Barry M Honda; Fabrizio Rossi; Patrizio Dimitri; Arthur J Hilliker
Journal:  Genetics       Date:  2010-04-09       Impact factor: 4.562

5.  On the evolution of Yeti, a Drosophila melanogaster heterochromatin gene.

Authors:  Roberta Moschetti; Emanuele Celauro; Fulvio Cruciani; Ruggiero Caizzi; Patrizio Dimitri
Journal:  PLoS One       Date:  2014-11-18       Impact factor: 3.240

6.  Sex chromosomes and associated rDNA form a heterochromatic network in the polytene nuclei of Bactrocera oleae (Diptera: Tephritidae).

Authors:  Elena Drosopoulou; Ifigeneia Nakou; Jindra Síchová; Svatava Kubíčková; František Marec; Penelope Mavragani-Tsipidou
Journal:  Genetica       Date:  2012-07-24       Impact factor: 1.082

7.  HP1α is not necessary for the structural maintenance of centromeric heterochromatin.

Authors:  Artem K Velichko; Omar L Kantidze; Sergey V Razin
Journal:  Epigenetics       Date:  2011-03-01       Impact factor: 4.528

8.  Heterochromatin protein 1a is required for an open chromatin structure.

Authors:  Diane E Cryderman; Michael W Vitalini; Lori L Wallrath
Journal:  Transcription       Date:  2011-03

9.  A common telomeric gene silencing assay is affected by nucleotide metabolism.

Authors:  Marlies P Rossmann; Weijun Luo; Olga Tsaponina; Andrei Chabes; Bruce Stillman
Journal:  Mol Cell       Date:  2011-04-08       Impact factor: 17.970

10.  Chromosome mapping of dragline silk genes in the genomes of widow spiders (Araneae, Theridiidae).

Authors:  Yonghui Zhao; Nadia A Ayoub; Cheryl Y Hayashi
Journal:  PLoS One       Date:  2010-09-21       Impact factor: 3.240

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