Literature DB >> 12058070

Human chromosomes 9, 12, and 15 contain the nucleation sites of stress-induced nuclear bodies.

Marco Denegri1, Daniela Moralli, Mariano Rocchi, Marco Biggiogera, Elena Raimondi, Fabio Cobianchi, Luigi De Carli, Silvano Riva, Giuseppe Biamonti.   

Abstract

We previously reported the identification of a novel nuclear compartment detectable in heat-shocked HeLa cells that we termed stress-induced Src-activated during mitosis nuclear body (SNB). This structure is the recruitment center for heat shock factor 1 and for a number of RNA processing factors, among a subset of Serine-Arginine splicing factors. In this article, we show that stress-induced SNBs are detectable in human but not in hamster cells. By means of hamster>human cell hybrids, we have identified three human chromosomes (9, 12, and 15) that are individually able to direct the formation of stress bodies in hamster cells. Similarly to stress-induced SNB, these bodies are sites of accumulation of hnRNP A1-interacting protein and heat shock factor 1, are usually associated to nucleoli, and consist of clusters of perichromatin granules. We show that the p13-q13 region of human chromosome 9 is sufficient to direct the formation of stress bodies in hamster>human cell hybrids. Fluorescence in situ hybridization experiments demonstrate that the pericentromeric heterochromatic q12 band of chromosome 9 and the centromeric regions of chromosomes 12 and 15 colocalize with stress-induced SNBs in human cells. Our data indicate that human chromosomes 9, 12, and 15 contain the nucleation sites of stress bodies in heat-shocked HeLa cells.

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Year:  2002        PMID: 12058070      PMCID: PMC117625          DOI: 10.1091/mbc.01-12-0569

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  41 in total

1.  Regional and temporal specialization in the nucleus: a transcriptionally-active nuclear domain rich in PTF, Oct1 and PIKA antigens associates with specific chromosomes early in the cell cycle.

Authors:  A Pombo; P Cuello; W Schul; J B Yoon; R G Roeder; P R Cook; S Murphy
Journal:  EMBO J       Date:  1998-03-16       Impact factor: 11.598

2.  Gene targeting to the centromeric DNA of a human minichromosome.

Authors:  E Raimondi; M Balzaretti; D Moralli; P Vagnarelli; F Tredici; M Bensi; L De Carli
Journal:  Hum Gene Ther       Date:  1996-06-10       Impact factor: 5.695

3.  Structural organization of multiple alphoid subsets coexisting on human chromosomes 1, 4, 5, 7, 9, 15, 18, and 19.

Authors:  P Finelli; R Antonacci; R Marzella; A Lonoce; N Archidiacono; M Rocchi
Journal:  Genomics       Date:  1996-12-15       Impact factor: 5.736

4.  Assignment of SAFB encoding Hsp27 ERE-TATA binding protein (HET)/scaffold attachment factor B (SAF-B) to human chromosome 19 band p13.

Authors:  B R DuPont; D K Garcia; T M Sullivan; S L Naylor; S Oesterreich
Journal:  Cytogenet Cell Genet       Date:  1997

5.  Localization of a putative transcriptional regulator (ATRX) at pericentromeric heterochromatin and the short arms of acrocentric chromosomes.

Authors:  T L McDowell; R J Gibbons; H Sutherland; D M O'Rourke; W A Bickmore; A Pombo; H Turley; K Gatter; D J Picketts; V J Buckle; L Chapman; D Rhodes; D R Higgs
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

6.  Heterochromatin protein 1 modifies mammalian PEV in a dose- and chromosomal-context-dependent manner.

Authors:  R Festenstein; S Sharghi-Namini; M Fox; K Roderick; M Tolaini; T Norton; A Saveliev; D Kioussis; P Singh
Journal:  Nat Genet       Date:  1999-12       Impact factor: 38.330

7.  Nucleolar accumulation of poly (A)+ RNA in heat-shocked yeast cells: implication of nucleolar involvement in mRNA transport.

Authors:  T Tani; R J Derby; Y Hiraoka; D L Spector
Journal:  Mol Biol Cell       Date:  1996-01       Impact factor: 4.138

8.  Etoposide induces the dispersal of DNA ligase I from replication factories.

Authors:  A Montecucco; R Rossi; G Ferrari; A I Scovassi; E Prosperi; G Biamonti
Journal:  Mol Biol Cell       Date:  2001-07       Impact factor: 4.138

9.  Reproducible compartmentalization of individual chromosome domains in human CNS cells revealed by in situ hybridization and three-dimensional reconstruction.

Authors:  L Manuelidis; J Borden
Journal:  Chromosoma       Date:  1988       Impact factor: 4.316

10.  The human polycomb group complex associates with pericentromeric heterochromatin to form a novel nuclear domain.

Authors:  A J Saurin; C Shiels; J Williamson; D P Satijn; A P Otte; D Sheer; P S Freemont
Journal:  J Cell Biol       Date:  1998-08-24       Impact factor: 10.539

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  35 in total

1.  Influences of chromosome size, gene density and nuclear position on the frequency of constitutional translocations in the human population.

Authors:  Wendy A Bickmore; Peter Teague
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

2.  Transcriptional activation of a constitutive heterochromatic domain of the human genome in response to heat shock.

Authors:  Nicoletta Rizzi; Marco Denegri; Ilaria Chiodi; Margherita Corioni; Rut Valgardsdottir; Fabio Cobianchi; Silvano Riva; Giuseppe Biamonti
Journal:  Mol Biol Cell       Date:  2003-11-14       Impact factor: 4.138

Review 3.  Transcription of tandemly repetitive DNA: functional roles.

Authors:  Maria Assunta Biscotti; Adriana Canapa; Mariko Forconi; Ettore Olmo; Marco Barucca
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

Review 4.  Heat shock factors: integrators of cell stress, development and lifespan.

Authors:  Malin Akerfelt; Richard I Morimoto; Lea Sistonen
Journal:  Nat Rev Mol Cell Biol       Date:  2010-07-14       Impact factor: 94.444

Review 5.  Mechanisms of heat shock response in mammals.

Authors:  Artem K Velichko; Elena N Markova; Nadezhda V Petrova; Sergey V Razin; Omar L Kantidze
Journal:  Cell Mol Life Sci       Date:  2013-04-30       Impact factor: 9.261

6.  RNA splicing control: yet another gene regulatory role for long nuclear noncoding RNAs.

Authors:  Xinying Zong; Vidisha Tripathi; Kannanganattu V Prasanth
Journal:  RNA Biol       Date:  2011-11-01       Impact factor: 4.652

7.  Structure of human heat-shock transcription factor 1 in complex with DNA.

Authors:  Tobias Neudegger; Jacob Verghese; Manajit Hayer-Hartl; F Ulrich Hartl; Andreas Bracher
Journal:  Nat Struct Mol Biol       Date:  2016-01-04       Impact factor: 15.369

8.  High-resolution whole-genome sequencing reveals that specific chromatin domains from most human chromosomes associate with nucleoli.

Authors:  Silvana van Koningsbruggen; Marek Gierlinski; Pietá Schofield; David Martin; Geoffey J Barton; Yavuz Ariyurek; Johan T den Dunnen; Angus I Lamond
Journal:  Mol Biol Cell       Date:  2010-09-08       Impact factor: 4.138

9.  SAGA and a novel Drosophila export complex anchor efficient transcription and mRNA export to NPC.

Authors:  Maria M Kurshakova; Alexey N Krasnov; Daria V Kopytova; Yulii V Shidlovskii; Julia V Nikolenko; Elena N Nabirochkina; Danièle Spehner; Patrick Schultz; Làszlò Tora; Sofia G Georgieva
Journal:  EMBO J       Date:  2007-11-22       Impact factor: 11.598

10.  Proteomic identification of heterogeneous nuclear ribonucleoprotein L as a novel component of SLM/Sam68 Nuclear Bodies.

Authors:  Prabhakar Rajan; Caroline Dalgliesh; Cyril F Bourgeois; Monika Heiner; Kaveh Emami; Emma L Clark; Albrecht Bindereif; James Stevenin; Craig N Robson; Hing Y Leung; David J Elliott
Journal:  BMC Cell Biol       Date:  2009-11-13       Impact factor: 4.241

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