Literature DB >> 14612446

Cation-pi interactions as determinants for binding of the compatible solutes glycine betaine and proline betaine by the periplasmic ligand-binding protein ProX from Escherichia coli.

André Schiefner1, Jason Breed, Linda Bösser, Susanne Kneip, Jutta Gade, Gudrun Holtmann, Kay Diederichs, Wolfram Welte, Erhard Bremer.   

Abstract

Compatible solutes such as glycine betaine and proline betaine are accumulated to exceedingly high intracellular levels by many organisms in response to high osmolarity to offset the loss of cell water. They are excluded from the immediate hydration shell of proteins and thereby stabilize their native structure. Despite their exclusion from protein surfaces, the periplasmic ligand-binding protein ProX from the Escherichia coli ATP-binding cassette transport system ProU binds the compatible solutes glycine betaine and proline betaine with high affinity and specificity. To understand the mechanism of compatible solute binding, we determined the high resolution structure of ProX in complex with its ligands glycine betaine and proline betaine. This crystallographic study revealed that cation-pi interactions between the positive charge of the quaternary amine of the ligands and three tryptophan residues forming a rectangular aromatic box are the key determinants of the high affinity binding of compatible solutes by ProX. The structural analysis was combined with site-directed mutagenesis of the ligand binding pocket to estimate the contributions of the tryptophan residues involved in binding.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 14612446     DOI: 10.1074/jbc.M309771200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  47 in total

1.  Genetic control of osmoadaptive glycine betaine synthesis in Bacillus subtilis through the choline-sensing and glycine betaine-responsive GbsR repressor.

Authors:  Gabriele Nau-Wagner; Daniela Opper; Anne Rolbetzki; Jens Boch; Bettina Kempf; Tamara Hoffmann; Erhard Bremer
Journal:  J Bacteriol       Date:  2012-03-09       Impact factor: 3.490

2.  Distinctive solvation patterns make renal osmolytes diverse.

Authors:  Ruby Jackson-Atogi; Prem Kumar Sinha; Jörg Rösgen
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

3.  Use of urea and glycine betaine to quantify coupled folding and probe the burial of DNA phosphates in lac repressor-lac operator binding.

Authors:  Jiang Hong; Mike W Capp; Ruth M Saecker; M Thomas Record
Journal:  Biochemistry       Date:  2005-12-27       Impact factor: 3.162

4.  Structure-guided function discovery of an NRPS-like glycine betaine reductase for choline biosynthesis in fungi.

Authors:  Yang Hai; Arthur M Huang; Yi Tang
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-06       Impact factor: 11.205

5.  OpuF, a New Bacillus Compatible Solute ABC Transporter with a Substrate-Binding Protein Fused to the Transmembrane Domain.

Authors:  Laura Teichmann; Henriette Kümmel; Bianca Warmbold; Erhard Bremer
Journal:  Appl Environ Microbiol       Date:  2018-10-01       Impact factor: 4.792

6.  Characterization of the glycine betaine biosynthetic genes in the moderately halophilic bacterium Halobacillus dabanensis D-8(T).

Authors:  Zhi Jing Gu; Lei Wang; Daniel Le Rudulier; Bo Zhang; Su Sheng Yang
Journal:  Curr Microbiol       Date:  2008-07-26       Impact factor: 2.188

7.  The compatible-solute-binding protein OpuAC from Bacillus subtilis: ligand binding, site-directed mutagenesis, and crystallographic studies.

Authors:  Sander H J Smits; Marina Höing; Justin Lecher; Mohamed Jebbar; Lutz Schmitt; Erhard Bremer
Journal:  J Bacteriol       Date:  2008-06-20       Impact factor: 3.490

8.  Mechanistic Insight into Trimethylamine N-Oxide Recognition by the Marine Bacterium Ruegeria pomeroyi DSS-3.

Authors:  Chun-Yang Li; Xiu-Lan Chen; Xuan Shao; Tian-Di Wei; Peng Wang; Bin-Bin Xie; Qi-Long Qin; Xi-Ying Zhang; Hai-Nan Su; Xiao-Yan Song; Mei Shi; Bai-Cheng Zhou; Yu-Zhong Zhang
Journal:  J Bacteriol       Date:  2015-08-17       Impact factor: 3.490

9.  Analysis of the secretome and identification of novel constituents from culture filtrate of bacillus Calmette-Guerin using high-resolution mass spectrometry.

Authors:  Jianhua Zheng; Xianwen Ren; Candong Wei; Jian Yang; Yongfeng Hu; Liguo Liu; Xingye Xu; Jin Wang; Qi Jin
Journal:  Mol Cell Proteomics       Date:  2013-04-24       Impact factor: 5.911

10.  Ligand binding and crystal structures of the substrate-binding domain of the ABC transporter OpuA.

Authors:  Justina C Wolters; Ronnie P-A Berntsson; Nadia Gul; Akira Karasawa; Andy-Mark W H Thunnissen; Dirk-Jan Slotboom; Bert Poolman
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.