Literature DB >> 30097444

OpuF, a New Bacillus Compatible Solute ABC Transporter with a Substrate-Binding Protein Fused to the Transmembrane Domain.

Laura Teichmann1, Henriette Kümmel1, Bianca Warmbold1, Erhard Bremer2,3.   

Abstract

The accumulation of compatible solutes is a common defense of bacteria against the detrimental effects of high osmolarity. Uptake systems for these compounds are cornerstones in cellular osmostress responses because they allow the energy-preserving scavenging of osmostress protectants from environmental sources. Bacillus subtilis is well studied with respect to the import of compatible solutes and its five transport systems (OpuA, OpuB, OpuC, OpuD, and OpuE), for these stress protectants have previously been comprehensively studied. Building on this knowledge and taking advantage of the unabated appearance of new genome sequences of members of the genus Bacillus, we report here the discovery, physiological characterization, and phylogenomics of a new member of the Opu family of transporters, OpuF (OpuFA-OpuFB). OpuF is not present in B. subtilis but it is widely distributed in members of the large genus Bacillus OpuF is a representative of a subgroup of ATP-binding cassette (ABC) transporters in which the substrate-binding protein (SBP) is fused to the transmembrane domain (TMD). We studied the salient features of the OpuF transporters from Bacillus infantis and Bacillus panaciterrae by functional reconstitution in a B. subtilis chassis strain lacking known Opu transporters. A common property of the examined OpuF systems is their substrate profile; OpuF mediates the import of glycine betaine, proline betaine, homobetaine, and the marine osmolyte dimethylsulfoniopropionate (DMSP). An in silico model of the SBP domain of the TMD-SBP hybrid protein OpuFB was established. It revealed the presence of an aromatic cage, a structural feature commonly present in ligand-binding sites of compatible solute importers.IMPORTANCE The high-affinity import of compatible solutes from environmental sources is an important aspect of the cellular defense of many bacteria and archaea against the harmful effects of high external osmolarity. The accumulation of these osmostress protectants counteracts high-osmolarity-instigated water efflux, a drop in turgor to nonphysiological values, and an undue increase in molecular crowding of the cytoplasm; they thereby foster microbial growth under osmotically unfavorable conditions. Importers for compatible solutes allow the energy-preserving scavenging of osmoprotective and physiologically compliant organic solutes from environmental sources. We report here the discovery, exemplary physiological characterization, and phylogenomics of a new compatible solute importer, OpuF, widely found in members of the Bacillus genus. The OpuF system is a representative of a growing subgroup of ABC transporters in which the substrate-scavenging function of the substrate-binding protein (SBP) and the membrane-embedded substrate translocating subunit (TMD) are fused into a single polypeptide chain.
Copyright © 2018 American Society for Microbiology.

Entities:  

Keywords:  ABC transporter; Bacillus; compatible solute; glycine betaine; osmoregulation; substrate-binding protein

Mesh:

Substances:

Year:  2018        PMID: 30097444      PMCID: PMC6182910          DOI: 10.1128/AEM.01728-18

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  111 in total

1.  Structural basis for the binding of compatible solutes by ProX from the hyperthermophilic archaeon Archaeoglobus fulgidus.

Authors:  André Schiefner; Gudrun Holtmann; Kay Diederichs; Wolfram Welte; Erhard Bremer
Journal:  J Biol Chem       Date:  2004-08-11       Impact factor: 5.157

Review 2.  A structural classification of substrate-binding proteins.

Authors:  Ronnie P-A Berntsson; Sander H J Smits; Lutz Schmitt; Dirk-Jan Slotboom; Bert Poolman
Journal:  FEBS Lett       Date:  2010-04-20       Impact factor: 4.124

3.  Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Authors:  Zoya Ignatova; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-09       Impact factor: 11.205

4.  Conformational dynamics in substrate-binding domains influences transport in the ABC importer GlnPQ.

Authors:  Giorgos Gouridis; Gea K Schuurman-Wolters; Evelyn Ploetz; Florence Husada; Ruslan Vietrov; Marijn de Boer; Thorben Cordes; Bert Poolman
Journal:  Nat Struct Mol Biol       Date:  2014-12-08       Impact factor: 15.369

Review 5.  Osmosensing and osmoregulatory compatible solute accumulation by bacteria.

Authors:  J M Wood; E Bremer; L N Csonka; R Kraemer; B Poolman; T van der Heide; L T Smith
Journal:  Comp Biochem Physiol A Mol Integr Physiol       Date:  2001-10       Impact factor: 2.320

6.  Ligand binding and crystal structures of the substrate-binding domain of the ABC transporter OpuA.

Authors:  Justina C Wolters; Ronnie P-A Berntsson; Nadia Gul; Akira Karasawa; Andy-Mark W H Thunnissen; Dirk-Jan Slotboom; Bert Poolman
Journal:  PLoS One       Date:  2010-04-29       Impact factor: 3.240

7.  Alternating-access mechanism in conformationally asymmetric trimers of the betaine transporter BetP.

Authors:  Camilo Perez; Caroline Koshy; Ozkan Yildiz; Christine Ziegler
Journal:  Nature       Date:  2012-09-02       Impact factor: 49.962

8.  Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement.

Authors:  Rainer Borriss; Antoine Danchin; Colin R Harwood; Claudine Médigue; Eduardo P C Rocha; Agnieszka Sekowska; David Vallenet
Journal:  Microb Biotechnol       Date:  2018-01       Impact factor: 5.813

Review 9.  Cyclic di-AMP: another second messenger enters the fray.

Authors:  Rebecca M Corrigan; Angelika Gründling
Journal:  Nat Rev Microbiol       Date:  2013-07-01       Impact factor: 60.633

10.  Complete Genome Sequences of Bacillus subtilis subsp. subtilis Laboratory Strains JH642 (AG174) and AG1839.

Authors:  Janet L Smith; Jonathan M Goldberg; Alan D Grossman
Journal:  Genome Announc       Date:  2014-07-03
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1.  The organosulfur compound dimethylsulfoniopropionate (DMSP) is utilized as an osmoprotectant by Vibrio species.

Authors:  Gwendolyn J Gregory; Katherine E Boas; E Fidelma Boyd
Journal:  Appl Environ Microbiol       Date:  2020-12-18       Impact factor: 4.792

2.  Gating by ionic strength and safety check by cyclic-di-AMP in the ABC transporter OpuA.

Authors:  Hendrik R Sikkema; Marco van den Noort; Jan Rheinberger; Marijn de Boer; Sabrina T Krepel; Gea K Schuurman-Wolters; Cristina Paulino; Bert Poolman
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Journal:  Microorganisms       Date:  2022-04-24

4.  Proteogenomic Insights into the Physiology of Marine, Sulfate-Reducing, Filamentous Desulfonema limicola and Desulfonema magnum.

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5.  Evidence from Mutational Analysis for a Single Transmembrane Substrate Binding Site in the Histidine ATP-Binding Cassette Transporter of Salmonella enterica Serovar Typhimurium.

Authors:  Johanna Heuveling; Heidi Landmesser; Erwin Schneider
Journal:  J Bacteriol       Date:  2018-12-20       Impact factor: 3.490

6.  Comparative Genomics of Marine Sponge-Derived Streptomyces spp. Isolates SM17 and SM18 With Their Closest Terrestrial Relatives Provides Novel Insights Into Environmental Niche Adaptations and Secondary Metabolite Biosynthesis Potential.

Authors:  Eduardo L Almeida; Andrés Felipe Carrillo Rincón; Stephen A Jackson; Alan D W Dobson
Journal:  Front Microbiol       Date:  2019-07-26       Impact factor: 5.640

7.  The GbsR Family of Transcriptional Regulators: Functional Characterization of the OpuAR Repressor.

Authors:  Stefanie Ronzheimer; Bianca Warmbold; Christian Arnhold; Erhard Bremer
Journal:  Front Microbiol       Date:  2018-10-24       Impact factor: 5.640

8.  Comparative Metagenomic Study of Rhizospheric and Bulk Mercury-Contaminated Soils in the Mining District of Almadén.

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  8 in total

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